Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0155 ATGGGGCTTTGTGATGAGGTGGCAATCAAGCAGTTGCAGTCCCTCATGGAAGACTTGGATGAGCAACAGAAGAGCACATTCCAGAATATGCACCAGGGCTATCCAACAGAAACATTAGTTCGCTTTCTCAAAGCAAGGGATGGGAATGTTTCCAAAGCCCACAAAATGTTAATTGATTGTTTGCAATGGAGATTGGAAAATGAGATTGACAATGTTTTACAGAAGCCAATCCCCATTGATCTGTACAGAGGTGTGAGAGATTCTCAACTCATAGGAATGTCCGGTTACACAAAGGAGGGTCTACCTGTCATTGCTGTTGGTGTTGGGCTCAGCACATACGACAAGGTTTCTGACAAATACTATGTACAGTCACACATCCAAATGAATGAATATAGGGACTGCGTGATCTTGCCAAAAGCTACAAAGAAGCATGGACGATACATTGGCTCCTGTGTGAAAGTCTTGGATATGACTGGTTTAAAACTATCAGCACTGAGCCAAATGAGGCTTTTGACTGCTATATCTACCATAGATGACTTGAACTACCCAGAAAAGACAGACTCATACTATATTGTTAATGTTCCATATGTATTCTCAGCATGTTGGAAGGTTGTAAAGCCTCTATTGCAAGAAAGAACAAGGAGGAAAGTTCAAGTCCTGCAAGGTTGTGGGAGGGAAGAATTACTCAGGGTAATGGACTATGCATCCCTCCCACACTTTTGCAAGAAGGAGGATTCCAAGTTACCCCGGCATCATGCAGCAGTGAATGCTGGAAACTGTTTCTCTTTTGATCATGTCTTCCATAAACAGCTCTATAATTACATCAAGCAGCAAGCTATCATCATGGAGTCCATATCACCAATCAAACAAGGGTCCTTCTATGTAGACTTGCCAGAGCCAGACCCAGATGATGCCAAAATCGCCAAGACTATAGAAACCAAGTTCCACAAACTGGATATTCAGCATGGCTTAAAAAATTCACTAAATGGCATTGTTGTTAATGGTATTTGA 1011 0.4194 MGLCDEVAIKQLQSLMEDLDEQQKSTFQNMHQGYPTETLVRFLKARDGNVSKAHKMLIDCLQWRLENEIDNVLQKPIPIDLYRGVRDSQLIGMSGYTKEGLPVIAVGVGLSTYDKVSDKYYVQSHIQMNEYRDCVILPKATKKHGRYIGSCVKVLDMTGLKLSALSQMRLLTAISTIDDLNYPEKTDSYYIVNVPYVFSACWKVVKPLLQERTRRKVQVLQGCGREELLRVMDYASLPHFCKKEDSKLPRHHAAVNAGNCFSFDHVFHKQLYNYIKQQAIIMESISPIKQGSFYVDLPEPDPDDAKIAKTIETKFHKLDIQHGLKNSLNGIVVNGI* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0155 336 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Dod08g0155 336 PANTHER - 1 335 - -
Dod08g0155 336 PANTHER OS09G0258000 PROTEIN 1 335 - -
Dod08g0155 336 SUPERFAMILY CRAL/TRIO domain 81 240 IPR036865 -
Dod08g0155 336 SUPERFAMILY CRAL/TRIO N-terminal domain 17 75 IPR036273 -
Dod08g0155 336 SMART sec14_4 85 246 IPR001251 -
Dod08g0155 336 Coils Coil 9 29 - -
Dod08g0155 336 CDD SEC14 82 240 IPR001251 -
Dod08g0155 336 Gene3D - 4 280 IPR036865 -
Dod08g0155 336 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 249 IPR001251 -
Dod08g0155 336 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Dod08g0155 336 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0155 Dod-Chr8 1700239 1704758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0155 29 318 Acyl Lipid Metabolism Gene Families AT1G55840 67.698 3.04e-157 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0155 - - gmx:100817955 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0155 08 1700239 1704758 Dod08g0155 08 1700239 1704758 ECH
Dod05g0666 05 9919548 9924389 Dod08g0155 08 1700239 1704758 PCT