Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0666 ATGGGTAGCTGCAATAATCAGGAGGCAATCAAGCAGTTACAGTCATTGATGGAAAATGTGGATGAGCAACAGAAGATCACATTCCAGAATATGCACCAGGGCTACCCAACTGAAACATTAGTACGGTTTCTCAAAGCAAGGGACTGGAATGTTGCCAAATCTCATAAAATGTTAGTTGATTGTTTACAATGGAGAGTGGAAAATGAGATTGACAATGTTTTAGCGAAGCCGATCCCTGCAGATGTATACAGAGCGGTGCGAGATTCTCAACTAATAGGGATGTCTGGTTACTCAAAGGAGGGTCTACCTGTCATTGCTATTGGTGTTGGGCTCAGCACATTTGACAAAGCATCTGACAAATACTATGTACAGTCACACATCCAAATGAACGAATATAGGGATCAGGTGATCTTGCCAACAGCTACAAAGAAGCATGGACGTTACATCGGAACTTGTGTGAAAATCTTGGATATGACTGGTTTAAAATTTTCAGCACTGAACCAAATGAGGCTGTTAACTGCTATATCTACAATTGACGACTTGAACTACCCGGAAAAGACCGACTCGTATTATATCGTTAATGCACCGTATGTATTCTCGGCATGTTGGAAGGTTGTAAAGCCCCTTTTGCAAGAAAGAACAAGGAAGAAAGTCCAGGTACTGCAAGGTTGTGGTAAGGAGGAATTACTGAAGGTTATGGACCATGCATCCCTCCCACACTTTTGCAGGAAAGAAGATTCGAGGTCCTCGCGACACCATGCAGCAGCAAATACTGAAAACTGCTTCTCCTTTGATCATGTCTTCCATCAACAACTCTACAATTACATCAAGCAGCAAGCTATCATGATGGACACCATATCACCAATCAGACAGGGGTCCTTCTATGTAGACTTGCCAGAGCCAGACCCGGACGACGCCAAAATCGCCGCGACCATTGAAACCGAGTTGCACAAACTGGAGAATCAGAATGGCTTTATCAACTCAATGAAAGGTCTTGCAGTTAATGGGCGGCATTTGAAAGCTGGCTAG 1029 0.4354 MGSCNNQEAIKQLQSLMENVDEQQKITFQNMHQGYPTETLVRFLKARDWNVAKSHKMLVDCLQWRVENEIDNVLAKPIPADVYRAVRDSQLIGMSGYSKEGLPVIAIGVGLSTFDKASDKYYVQSHIQMNEYRDQVILPTATKKHGRYIGTCVKILDMTGLKFSALNQMRLLTAISTIDDLNYPEKTDSYYIVNAPYVFSACWKVVKPLLQERTRKKVQVLQGCGKEELLKVMDHASLPHFCRKEDSRSSRHHAAANTENCFSFDHVFHQQLYNYIKQQAIMMDTISPIRQGSFYVDLPEPDPDDAKIAATIETELHKLENQNGFINSMKGLAVNGRHLKAG* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0666 342 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 79 250 IPR001251 -
Dod05g0666 342 Pfam CRAL/TRIO domain 90 241 IPR001251 -
Dod05g0666 342 SMART CRAL_TRIO_N_2 36 61 IPR011074 -
Dod05g0666 342 SUPERFAMILY CRAL/TRIO N-terminal domain 7 74 IPR036273 -
Dod05g0666 342 PANTHER OS09G0258000 PROTEIN 6 336 - -
Dod05g0666 342 SUPERFAMILY CRAL/TRIO domain 81 241 IPR036865 -
Dod05g0666 342 Pfam CRAL/TRIO, N-terminal domain 9 60 IPR011074 -
Dod05g0666 342 Gene3D - 3 275 IPR036865 -
Dod05g0666 342 Coils Coil 6 26 - -
Dod05g0666 342 CDD SEC14 83 241 IPR001251 -
Dod05g0666 342 PANTHER - 6 336 - -
Dod05g0666 342 SMART sec14_4 79 247 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0666 Dod-Chr5 9919548 9924389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0666 6 329 Acyl Lipid Metabolism Gene Families AT5G47730 66.462 1.46e-160 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0666 - - gmx:100817955 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0666 05 9919548 9924389 Dod05g0666 05 9919548 9924389 ECH
Dod05g0666 05 9919548 9924389 Dod08g0155 08 1700239 1704758 PCT