Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0121 ATGAAAATGGCGGTGAAAAACTCTCTTCAAATAACCGGAAATGGTTCTGATGCTTATGATGATGATGAGCATCCCAAAAGGACTGGAACTCTAACGAGTGCTGTGGCTCATATCATTACTGCTATTATTGGTGCTGGTGTTCTCTCTCTAGCATGGAGTACTTCTCAATTAGGATGGATTGCAGGACCAGTTGCCTTGCTTTTATGTGCAATTGTCACCTATGTTTCTTCATTCCTCCTTTCCGATTGCTACAGAACTCCAGATCCTGTATCTGGGAAACGAAACTACTCCTACATGGATGCTGTTAGAGTCTATCTTGGTAATAAAAGGACATGGTTGGCTGGCTTGCTTCAATATTTGACCTTGTATGGGACTAGTACTGCTTATGTAATTACCACAGCTTCATGTATAAGAGCAATTCTGAAATCAAATTGCTATCACAAGGAAGGGCATCACGCTCCTTGTAACTATGGGGATACCGTGTACATGATACTGTTTGGAGTTGTTCAGATTGTAATGTCATTCATACCTGATCTCCACAACATGACATGGGTTTCAGTTGTTGCGGCCTTAATGTCTTTTACATACTCATCTATAGGACTAGGACTTGGCATCACAACAGTAATAGAAAATGGAAGAATTATGGGGAGTCTGACCGGAGTTCCGACTTCAAATATTGCTGACAAAGTCTGGTTAATCTTCCAAGCACTTGCTGACATTGCCTTTGCCTATCCATACTCTATCATACTCCTTGAGATACAGGACACTCTTGAGTCTCCTCCTGCAGAAAACAAGACCATGAAAAAGGCCTCTATGGTTGCTGTCTTCATTACAACATTTTTCTACCTCTGCTGTGGATGCTTTGGATATGCAGCTTTTGGAAATCAAACACCAGGAAACCTCTTGACTGGGTTTGGATTTTATGAGCCTTACTGGCTCATTGACTTCGCCAATGCTTGCGTTGTTCTTCATTTGGTGGGAGGATATCAGATTTACTGCCAGCCAATATATAATGCTGTTGATAGATGGTGTTCAAGGAAATACCCCAACAGTGGATTTGTGAATAATTTCTACAGATTGAAACTGCTTCGGTTGCCAGCTTTTGAGCTAAATCTGTTCAGAATATGTTTTAGAACAGCCTATGTGATTTCCACTACTGGACTTGCAATCCTCTTCCCTTATTTCAATCAAGTTTTAGGAGTGCTAGGGGCCATAAGCTTTTGGCCACTGGCTATATACTTCCCTGTAGAGATGTACCTTGTGCAGAAGAAAATCGGAGCTTGGTCTAGGAAATGGATTGTTCTTAGGACTTTTAGCTTTGTATGCTTTCTTGTGTCAGTGGTGGGTCTAGTGGGATCGCTTGAAGGAATCATAAGTGAGAAACTTAGCTGA 1392 0.4145 MKMAVKNSLQITGNGSDAYDDDEHPKRTGTLTSAVAHIITAIIGAGVLSLAWSTSQLGWIAGPVALLLCAIVTYVSSFLLSDCYRTPDPVSGKRNYSYMDAVRVYLGNKRTWLAGLLQYLTLYGTSTAYVITTASCIRAILKSNCYHKEGHHAPCNYGDTVYMILFGVVQIVMSFIPDLHNMTWVSVVAALMSFTYSSIGLGLGITTVIENGRIMGSLTGVPTSNIADKVWLIFQALADIAFAYPYSIILLEIQDTLESPPAENKTMKKASMVAVFITTFFYLCCGCFGYAAFGNQTPGNLLTGFGFYEPYWLIDFANACVVLHLVGGYQIYCQPIYNAVDRWCSRKYPNSGFVNNFYRLKLLRLPAFELNLFRICFRTAYVISTTGLAILFPYFNQVLGVLGAISFWPLAIYFPVEMYLVQKKIGAWSRKWIVLRTFSFVCFLVSVVGLVGSLEGIISEKLS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0121 463 Pfam Transmembrane amino acid transporter protein 28 458 IPR013057 -
Dod08g0121 463 Gene3D Amino acid/polyamine transporter I 23 334 - -
Dod08g0121 463 PANTHER OS05G0424000 PROTEIN-RELATED 6 462 - -
Dod08g0121 463 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 6 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0121 Dod-Chr8 1315156 1318722 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0121 15 445 Organic Solute Cotransporters AT1G77380 54.965 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0121 K24917 - gmx:100786621 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0121 08 1315156 1318722 Dod08g0121 08 1315156 1318722 ECH
Dod05g0622 05 9312129 9315370 Dod08g0121 08 1315156 1318722 PCT
Dod08g0121 08 1315156 1318722 Dod05g0623 05 9322655 9343217 PCT