Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0623 ATGGGTGAACATGCCACTGAGAGCACCCCCTTTATTCAAACCTTTTCTTCTGGCGATCTGTTAGGTGCAGAGCCTTCCAGGAGAACTGGGACTGTGTGGAGTGCAGTATCACACATAATAACTGGTCTGATAGGAACAGGGGTGCTCTCTCTAGCTTGGGCTGTGGCACAGCTAGGGTGGATTGCTGGTCCATTGTGCATGATAAGCTTTTCATCCATTACCATTGTTTCTGCATTCCTTATCAGTGACTGCTATAGATACCCTCACCCTGAACATGGGGCTGTTAGGAACCCTTCCTACGTGTATGCTGTCAAGATGTACCTTGGAGCTACGAGGCAAAAGGTGTGTGGAGTGCTGACACATGCAAGCTTATTTGGGACTAGCACTGCCTATATCATTACAACCGGTACCTGCTTTAGGGCAATTCTGAAATCAAATTGTTATCACAAGGAAGGGCATCAGGCTCCCTGCAATTATGGGGATACTTTCTATATGGTACTGTTTGGATTAGTCCAGATTTTAATGTCATTCATACCAGATCTTCACAACATGGCATGGGTTTCAGTTGTTGCTGCAATTATGTCCTTTACATACTCATTCATAGGACTAGGACTTGGCATAGCAACAGTCATAGAAAATGGAAGAATTATGGGGAGCATGACAGGAGTACCTGCTGCTAATATTGCCGGCAAAGTATGGCTAGTCTTCCAAGCACTCGGTGACATTGCATTCGCGTATCCATACTCGGTTCTCCTCCTCGAGATACAGGACACACTAGAGTCTCCTCCACCAGAAAACCAAACCATGAAAAAGGCCTCAATGATTGCAATTTTCATCACAACATTCTTCTACCTTTGCTGTGGATGCTTTGGATATGCTGCTTTTGGAAATGCTACTCCAGGAAACCTCTTGACAGGGTTTGGGTTCTATGAGCCTTACTGGCTCATTGACATTGCTAATGCTTGCATCATTGTTCATTTGATTGGAGGATATCAGGTTTACAGCCAGCCAATATATAGTAATGCTGATAGATGGTGCTCAAGAAAATTCCCCAACAGTGGCTTTGTGAATAATTTCTACAAAGTTAAACTGCCTCTATTGCCAGCTTTTCAGCTCAATCTCTTCAGGTTCTGTTTCAGAACAGCCTATGTGATGTCAACAACTGGACTTGCAATCTTGTTTCCATACTTCAACCTAGTTCTAGGAGTGCTAGGAGCCATAAACTTCTGGCCACTTGCTATATATTTCCCAGTAGAGATGTACTTTGTACAAAAGAAAATTGGAGCATGGACCAAAAAATGGATTGTTCTAAGGACATTTAGCTTTGCTTGCTTTCTAGTGACAGTTGTGGGCTTTGTGGGGTCACTTGAAGGAATCATTAGTGCGAAACTTAGCTGA 1398 0.4349 MGEHATESTPFIQTFSSGDLLGAEPSRRTGTVWSAVSHIITGLIGTGVLSLAWAVAQLGWIAGPLCMISFSSITIVSAFLISDCYRYPHPEHGAVRNPSYVYAVKMYLGATRQKVCGVLTHASLFGTSTAYIITTGTCFRAILKSNCYHKEGHQAPCNYGDTFYMVLFGLVQILMSFIPDLHNMAWVSVVAAIMSFTYSFIGLGLGIATVIENGRIMGSMTGVPAANIAGKVWLVFQALGDIAFAYPYSVLLLEIQDTLESPPPENQTMKKASMIAIFITTFFYLCCGCFGYAAFGNATPGNLLTGFGFYEPYWLIDIANACIIVHLIGGYQVYSQPIYSNADRWCSRKFPNSGFVNNFYKVKLPLLPAFQLNLFRFCFRTAYVMSTTGLAILFPYFNLVLGVLGAINFWPLAIYFPVEMYFVQKKIGAWTKKWIVLRTFSFACFLVTVVGFVGSLEGIISAKLS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0623 465 Pfam Transmembrane amino acid transporter protein 28 460 IPR013057 -
Dod05g0623 465 PANTHER OS05G0424000 PROTEIN-RELATED 7 464 - -
Dod05g0623 465 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0623 Dod-Chr5 9322655 9343217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0623 27 460 Organic Solute Cotransporters AT5G09220 50.343 8.10e-169 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0623 K24917 - gmx:100786621 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0623 05 9322655 9343217 Dod05g0623 05 9322655 9343217 ECH
Dod08g0121 08 1315156 1318722 Dod05g0623 05 9322655 9343217 PCT