Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2232 ATGGAGAATCACAAGAGATTTGGACCACGTATTATTATTTCCTTGATCCTTTTTCTGATCCTTACTCAAAATTTATGTTCAACCGCGTTCGATAGCAGCGAGTATGAAGAATGGGAAGGCATTGAGAATGAAGCCAAAAGTCATATAGCCCATTCTATCTTAAGCTTCAGGAGTGAAATGGGAGACGTGGAAGAAGATGAATGGCAGATGGTGCAAACAAAGGGAAACCAATTTGTTGTGAACGGCCAGCCTTTCTATGTTAATGGATTCAACACTTACTGGCTGATGGTGTTTGCCGCGGATGAGTCCACCAGAGGAAAGGTCACTGATGTGTTCAAGCATGCATCCTCAGTGGGCATGACAGTCTGCAGGACTTGGGCCTTCAACGATGGCCAATGGCGGGCCCTTCAGAAATCTCCATCTGTTTATGATGAAGACGTATTCAAGGCCCTGGATTTTGTGGTAAGTGAAGCCAAGAAATACAAAATCAGGCTCATATTATCATTGGTTAACAACTGGGAGGCTTATGGTGGCAAAGCACAATATGTCAAATGGGGCAATGCTGCTGGCCTTAACTTGACCGCCGATGATGACTTCTTCTCACATCCAACTCTCAGAAGCTACTACAAGGCCCATGTCAAGGCAAGTTCCTCTGATTTGACGATACTCAACAGAGTTAATACATTCACAAACATCACTTATAAGGAAGATCCAACAATTTTTGCTTGGGAACTGATGAATGAGCCTCGGTGCATCTCAGATTCATCAGGTGATACGTTACAGGAATGGATAAAAGAAATGGCATTCTATGTGAAGAGCATTGATACGAAACACCTAGTGGAGATTGGACTAGAAGGATTTTATGGACCCTCCACGCCTCAGAGAGTTCAGTTCAACCCAAACTCATTTGCTCAACAGGTTGGAACAGATTTTATCAGGAATCACCAGGTTCTTGGCATCGACTTCGCTTCTGTTCACATGTATGCAGACTCTTGGATTTCACAATCAATCGCTGATACCCATCTCCCATTTATAAAGTCTTGGATGGAAGCCCACATAGAGGATGCAGAAAAGTACCTTGGAATGCCCGTTATTTTTGCTGAGTTTGGTGTATCTTCAAAAGATCCTGGCTACAATTCAACATACAGAGACACCCTTATAAACACTGTGTACAAGACCATCCTAAACTCCACAAAGAAAGGAGGTAGTGGGGCTGGAAGCCTTTTGTGGCAGCTCTTTCCTGATGGAACTGATTACATGGATGATGGATATGCAATTGTACTCTCAAAATCTCAATCCACCTCAAGCATTATGTCCCTTCAGTCCACAAGGCTTGCCCTGTTCAACTCCTTGTGTTCTAAGAAATGCCTATGGAGTTGTAAGAAGAAAAACATGATTGAGAAAATAATCTACCACGACGAACTCCAACACCATATGTGGAAACTCGCTAAATATGATGTTATGGCCATATAA 1473 0.4277 MENHKRFGPRIIISLILFLILTQNLCSTAFDSSEYEEWEGIENEAKSHIAHSILSFRSEMGDVEEDEWQMVQTKGNQFVVNGQPFYVNGFNTYWLMVFAADESTRGKVTDVFKHASSVGMTVCRTWAFNDGQWRALQKSPSVYDEDVFKALDFVVSEAKKYKIRLILSLVNNWEAYGGKAQYVKWGNAAGLNLTADDDFFSHPTLRSYYKAHVKASSSDLTILNRVNTFTNITYKEDPTIFAWELMNEPRCISDSSGDTLQEWIKEMAFYVKSIDTKHLVEIGLEGFYGPSTPQRVQFNPNSFAQQVGTDFIRNHQVLGIDFASVHMYADSWISQSIADTHLPFIKSWMEAHIEDAEKYLGMPVIFAEFGVSSKDPGYNSTYRDTLINTVYKTILNSTKKGGSGAGSLLWQLFPDGTDYMDDGYAIVLSKSQSTSSIMSLQSTRLALFNSLCSKKCLWSCKKKNMIEKIIYHDELQHHMWKLAKYDVMAI* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2232 490 Pfam Cellulase (glycosyl hydrolase family 5) 81 390 IPR001547 GO:0004553|GO:0071704
Dod07g2232 490 PANTHER - 12 475 IPR045053 GO:0004553
Dod07g2232 490 Gene3D Glycosidases 68 448 - -
Dod07g2232 490 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 12 475 - -
Dod07g2232 490 SUPERFAMILY (Trans)glycosidases 70 440 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2232 Dod-Chr7 54079145 54081486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2232 6 475 Glycoside Hydrolase AT5G01930 66.102 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2232 K19355 - gmx:100801139 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0929 01 17164165 17168050 Dod07g2232 07 54079145 54081486 PCT