Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0929 ATGGAGAGATTTGGGGTACGCATTATTTCTTTCATCCTTTTTCTGATTCTTTGTAAAACTTCAAGTATCAACGCAGTTGGTGGCAGTGTGAAGAATGAGGAATCGCACAAGGAAGAGCAAAATCATATAGCAAATTCCATCTCAAATTATGGGATTGAAATGGGTAACATGGAAGAAGATGAATGGCAAATGGTGCAAAAGAAAGGGAACCAATTTGTGGTGAACGACCAACCTTTCTATATTAATGGATTCAACACTTATTGGCTGATGGTGTTTGCTGTGGATGAGTGCACCAGAGGGAAGGTCACTGAGGTGTTCCAACAAGCTTCCTCGGTGGGCATGACAGTTTGTAGAACTTGGGCCTTCAACGATGGCCAGTGGCGGGCCCTACAAAAATCACCATCAAAACAGGCACTGGATTTTGTGGTAAGTGAAGCAAAGAAATTCAAAATCAGGCTCATATTATCTTTGACTAACAACTGGGAAGCGTATGGAGGCAAAGCACAATATGTGAAATGGGGCAAGGATGCTGGCCTTAACGTGACCAACGATGATGACTTCTTTTCACATCCAACTCTTAGAAGCTACTACAGGGCCCACACTGTGCTCAATAGAGTTAATACATTCACAAATATCACTTATAAGGAGGATCCGACTATTTTTGCATGGGAACTGATGAATGAGCCTAGATGCACCTCAAATTCCTCGGGAGATAAGCTACAGGATTGGATACAAGAAATGGCATTCCACGTGAAGAAAATTGATCCAAAGCACCTAGTAGAAGTTGGACTCGAAGGATTCTATGGCCCCTCAACACCTCAGAGAACTCAGTTCAATCCAAATACATATGCTCAACAGGTTGGAACTGATTTTATCAGGAACCACCTGGTTCTTGGTGTTGACTTCGCTTCTGTTCACATATATGCAGATTCTTGGATTTCACCACAAATTACTGATACCCACATCCCATTTATAAAATCATGGATGCAAGCCCACATTGAGGATGCTGAAAAGTATCTTGGAATGCCAGTTGTTTTTGCTGAGTTTGGTGTATCTTCAAAAGACCCTGGCTACAATACAACATATAGAGACACCCTTATAAGCACTGTCTACAACACCATCCTAAACTCCACAAAGAAAGGAGGGAGTGGTGCTGGAAGCCTTTTGTGGCAGGTCTTCCCTGAAGGAACTGATAACATGGATGATGGTTATGCAATTGTGATCTCAAAATCTCCTTCCACATCAAAAATTGTATCCCTTCATTCCAAAAGGCTTGCCTTGCTCAACTCAATGTGCTCTTCCAAATGCCAATGGAGTTGTAAAAAGAAGAAAGTGTTCGAGGAAACACTCTTTCATGATGAATTCTAA 1368 0.4174 MERFGVRIISFILFLILCKTSSINAVGGSVKNEESHKEEQNHIANSISNYGIEMGNMEEDEWQMVQKKGNQFVVNDQPFYINGFNTYWLMVFAVDECTRGKVTEVFQQASSVGMTVCRTWAFNDGQWRALQKSPSKQALDFVVSEAKKFKIRLILSLTNNWEAYGGKAQYVKWGKDAGLNVTNDDDFFSHPTLRSYYRAHTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSNSSGDKLQDWIQEMAFHVKKIDPKHLVEVGLEGFYGPSTPQRTQFNPNTYAQQVGTDFIRNHLVLGVDFASVHIYADSWISPQITDTHIPFIKSWMQAHIEDAEKYLGMPVVFAEFGVSSKDPGYNTTYRDTLISTVYNTILNSTKKGGSGAGSLLWQVFPEGTDNMDDGYAIVISKSPSTSKIVSLHSKRLALLNSMCSSKCQWSCKKKKVFEETLFHDEF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0929 455 PANTHER - 8 454 IPR045053 GO:0004553
Dod01g0929 455 SUPERFAMILY (Trans)glycosidases 65 413 IPR017853 -
Dod01g0929 455 Gene3D Glycosidases 62 429 - -
Dod01g0929 455 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 8 454 - -
Dod01g0929 455 Pfam Cellulase (glycosyl hydrolase family 5) 76 370 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0929 Dod-Chr1 17164165 17168050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0929 2 455 Glycoside Hydrolase AT5G01930 62.581 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0929 K19355 - gmx:100811794 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0929 01 17164165 17168050 Dod01g0929 01 17164165 17168050 ECH
Dod01g0929 01 17164165 17168050 Dod07g2232 07 54079145 54081486 PCT