Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2225 ATGAGGAGAAAGGTGAGTTTTTTGTGGTGTGTTTGGATTTTGCTATGTGGGTCTTGTTGTGTGGGGAGGTTTGTGGTGGAGAAGAACAATTTGAAGATCACTTCTCCAAGGTCACTGAGAGGTATATATGAATGTGCAATTGGGAACTTTGGGGTCCCAAAATATGGAGGAGCCTTGATTGGAGCTGTCGTGTACCCCAAGGTGAATCAGAACGGCTGTAAAAGATTTGAAGGTCTAGATAGTTTGTTTAGTTCCAGGCCTGGAGCATTTCCCACCTTTGTTCTTGTTGATCGGGGAGATTGCTACTTCACTTTAAAGGCTTGGAATGCCCAGAATGGTGGAGCAGCAGCGATTCTTGTTGCAGATGACAGGGTAGAGCCATTGATCACTATGGACACTCCTGAAGAAGGGAATGGTGCGAATGATGATGATTATGTTGAAAAGATTAGCATCCCTTCTGCCCTTATCAGCAAAGCACTCGGAGATAGCATCAAGAAGGCTCTCTCAAAGGGGGAGATGGTTAATGTAAACCTTGATTGGAGAGAGTCTCTTCCACATCCTGATGACAGAGTTGAGTATGAGTTTTGGACAAACAGCAATGATGAGTGTGGGCCAAAGTGTGAGAGCCAAATTAGTTTTGTCACAAGTTTTAAAGGTGCAGCACAGCTACTTGAGCAGAAAGGGTTCACTCACTTTACCCCTCACTATATAACTTGGTATTGCCCAGAAGCATTTATCTTGAGCAAACAATGCAAGTCTCAGTGCATAAACAACGGGAGGTACTGTGCACCAGATCCCGAGCAGGATTTCACAAGAGGGTATGATGGCAAAGATGTTGTTATTCAGAACTTGCGTCAAGCTTGCTTCTTTAAAGTGGCAAATGAAAGTGGAAAGCCTTGGCAGTGGTGGGACTATGTGACTGACTTCTCAATTCGCTGCCCAATGAGAGAGAATAGGTACAGTGAGGATTGCTCAGATCAAGTAATCAAATCTCTAGGTGTTGATGTGAAGAAGATTAAAGATTGTGTTGGGGATCCTCGTGCAGACGTTGAAAATCCTGTTCTTAAGGCCGAACAGGGTGCGCAGATTGGCAAAGGGTCTCGTGGTGATGTTACTATACTACCTACTCTCATCATAAACAACAGACAGTATAGAGGTAAGCTGTCAAGAGCAGCAGTACTCAAGGCAATCTGTTCAGCTTTCAAAGAGACCACTGAGCCATCAATTTGTTTAACTCCAGACATGGAAACAAATGAGTGTCTGGTAAACAATGGTGGTTGTTGGCAGGACAAATCTGCTAACATTACTGCATGCATGGACACTTTCCGAGGAAGAGTATGTGAATGCCCTATTGTACAAAATGTGAAATTTGTTGGTGATGGATATACACACTGTGAAGCTACAGGGGCCTTGAGGTGTGCAGTCAACAATGGAGGTTGTTGGAAGGGAGCCCAAGCTGGGAGGGTTTACTCAGCTTGTATCGATGACCACACAAAAGGATGCAAGTGTCCACCAGGATTCAGGGGTGATGGAGTCAACTCCTGTGAAGATATCAATGAGTGCAAAGAGAAATTGGCTTGCCAGTGCCCAGAGTGCAATTGCAAAAATACCTGGGGGAGTTATGAATGCAAATGCAATGGTGGTTTGTACTACATGCGAGAAAACGACATGTGTATAGGTAAATATACCGCTTCAGTGGCCACTTGGGGCTTTATTTGGATGGCTATTCTGATCATGACTGTTGCTGGAGCTGGGGGATATGCTTTTTACAAGTACAGAATCCAGAGATACATGGATTCCGAGATAAGGGCAATTATGGCCCAATACATGCCCTTGGATAATCAACCGGAGATCTCTAGTCAACTTCAAACTGATGTGTAG 1881 0.4434 MRRKVSFLWCVWILLCGSCCVGRFVVEKNNLKITSPRSLRGIYECAIGNFGVPKYGGALIGAVVYPKVNQNGCKRFEGLDSLFSSRPGAFPTFVLVDRGDCYFTLKAWNAQNGGAAAILVADDRVEPLITMDTPEEGNGANDDDYVEKISIPSALISKALGDSIKKALSKGEMVNVNLDWRESLPHPDDRVEYEFWTNSNDECGPKCESQISFVTSFKGAAQLLEQKGFTHFTPHYITWYCPEAFILSKQCKSQCINNGRYCAPDPEQDFTRGYDGKDVVIQNLRQACFFKVANESGKPWQWWDYVTDFSIRCPMRENRYSEDCSDQVIKSLGVDVKKIKDCVGDPRADVENPVLKAEQGAQIGKGSRGDVTILPTLIINNRQYRGKLSRAAVLKAICSAFKETTEPSICLTPDMETNECLVNNGGCWQDKSANITACMDTFRGRVCECPIVQNVKFVGDGYTHCEATGALRCAVNNGGCWKGAQAGRVYSACIDDHTKGCKCPPGFRGDGVNSCEDINECKEKLACQCPECNCKNTWGSYECKCNGGLYYMRENDMCIGKYTASVATWGFIWMAILIMTVAGAGGYAFYKYRIQRYMDSEIRAIMAQYMPLDNQPEISSQLQTDV* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2225 626 Gene3D - 21 187 - -
Dod07g2225 626 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 11 605 - -
Dod07g2225 626 Gene3D Laminin 411 456 - -
Dod07g2225 626 Gene3D Laminin 472 559 - -
Dod07g2225 626 SMART egfca_6 517 559 IPR001881 GO:0005509
Dod07g2225 626 Gene3D Glutaredoxin 268 402 - -
Dod07g2225 626 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 11 605 - -
Dod07g2225 626 CDD EGF_CA 517 548 - -
Dod07g2225 626 Pfam PA domain 61 164 IPR003137 -
Dod07g2225 626 ProSitePatterns Calcium-binding EGF-like domain signature. 517 543 IPR018097 GO:0005509
Dod07g2225 626 SUPERFAMILY PA domain 93 174 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2225 Dod-Chr7 54016948 54020946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2225 11 625 Miscellaneous Gene Families AT2G30290 69.530 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2225 - - gmx:100815266 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0941 01 17258811 17264643 Dod07g2225 07 54016948 54020946 PCT