Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2094 ATGAAAATGAACCAGGAAAAAATGAATGGGGTTGAGGCTGAGAAGCATCATAAGGAGAATGGGAATGAGAAGAAAACAGAATATGATGTGCAGGAGAAAATAGATTATGTGTTCAAGGTGGTGGTGATAGGGGACTCAGCAGTGGGAAAGACTCAAATGCTCTCAAGGTTTGCAAAGAATGAGTTCTGCTTTGACTCAAAGTCCACCATTGGAGTTGAATTCCAGACTAGGACTGTCACCATTAATGGCAAGGTCATCAAGGCCCAGATCTGGGACACTGCTGGCCAAGAAAGGTACAGGGCTGTGACAAGTGCATACTACAGGGGTGCATTAGGGGCCATGTTGGTGTATGACATAACTAAGAGGCAATCGTTTGATCATGTTGCAAGGTGGATTGAGGAACTGAGAGCACATGCAGGTAGCTCCATTGTGATCATGCTAGTTGGGAACAAAGGTGACCTTGTGGACCTTAGAGTGGTTCCAACTGAAGATGCAGTGGAGTTTGCAGAGGACCAAGGCCTTTTCTTCTCAGAGACTTCTGCACTCAGTGGTGACAATGTGGAGAGTGCATTCCTCAAATTGCTAGAAGAGATCAATAGGGTAGTCTCTAAAAGAACATTGGAATGCAGTAGTGTCATTAATAATGCTCCCACAATCAAAGGATCAAAGATAGATATAATGTCAGGTCCTGAATTGGAAATTAGTGAGATGAAGAAGTTGTCTTCATGCTCTTGTTGA 738 0.4363 MKMNQEKMNGVEAEKHHKENGNEKKTEYDVQEKIDYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWIEELRAHAGSSIVIMLVGNKGDLVDLRVVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKRTLECSSVINNAPTIKGSKIDIMSGPELEISEMKKLSSCSC* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2094 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 203 IPR027417 -
Dod07g2094 245 Pfam Ras family 39 199 IPR001806 GO:0003924|GO:0005525
Dod07g2094 245 SMART ras_sub_4 35 201 - -
Dod07g2094 245 PRINTS Transforming protein P21 ras signature 61 77 - -
Dod07g2094 245 PRINTS Transforming protein P21 ras signature 38 59 - -
Dod07g2094 245 PRINTS Transforming protein P21 ras signature 176 198 - -
Dod07g2094 245 PRINTS Transforming protein P21 ras signature 141 154 - -
Dod07g2094 245 PRINTS Transforming protein P21 ras signature 79 101 - -
Dod07g2094 245 CDD Rab11_like 35 198 - -
Dod07g2094 245 ProSiteProfiles small GTPase Rab1 family profile. 33 235 - -
Dod07g2094 245 SMART rho_sub_3 40 204 IPR001806 GO:0003924|GO:0005525
Dod07g2094 245 SMART ran_sub_2 43 240 - -
Dod07g2094 245 PANTHER - 6 245 - -
Dod07g2094 245 PANTHER RAS-RELATED PROTEIN RABA3 6 245 - -
Dod07g2094 245 TIGRFAM small_GTP: small GTP-binding protein domain 37 191 IPR005225 GO:0005525
Dod07g2094 245 ProSiteProfiles small GTPase Rho family profile. 31 202 - -
Dod07g2094 245 MobiDBLite consensus disorder prediction 1 26 - -
Dod07g2094 245 ProSiteProfiles small GTPase Ras family profile. 32 227 IPR001806 GO:0003924|GO:0005525
Dod07g2094 245 SMART rab_sub_5 38 201 - -
Dod07g2094 245 Gene3D - 30 223 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2094 Dod-Chr7 52073782 52075691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2094 K07904 - gmx:100799439 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2094 07 52073782 52075691 Dod07g2094 07 52073782 52075691 ECH
Dod01g3662 01 78006521 78008047 Dod07g2094 07 52073782 52075691 PCT