Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2073 ATGCAAAAAACCTTCGCCGGCGTTCCCTGCACGTCGCCGCTCTGCCGGCGGCTTGACACGCCGGGATGCAACGGCCGGAGAAGACTCTGCCAGTACCAGGTCTCCTACGGCGACGGCTCGTTCACCACCGGAGATTTCTCCACCGAAACCTTAACTTTCCGACGCGCCGCTGTCCCGCGCGTGGCGCTGGGATGCGGGCACGACAACGAGGGGCTTTTCATTGGTGCGGCGGGCCTGTTGGGCCTGGGCCGAGGAAAGCTCTCATTCCCATCCCAAACGGGCTCTTTGTTCTCAAAAAAATTCTCTTACTGTTTGGCGGACCGGGCCGCCTCGAGCAGACCGTCTTCCGTGGTCTTCGGAGACACAGCGGTCTCGAGAACGGCCCGGTTCACTCCTTTGTTAAAGAACCCGAAGCTCGGTACGTTTTATTATGTCGAGCTTATGGGGATCAGCGTTGGCGGGAGCCCTGTGCGCGGGATTTCCGCCTCGCTGTTCCGGCTTGACCGGATGGGTAACGGAGGGGTTATTATTGACTCGGGCACTTCGGTCACCCGGCTGACCCGGCCCGCTTATGTTGCCTTGAGAGATGCTTTTCGAGTCGGGTCGGCCAGGTTGAAGCGGGCGCCCGAGTTCTCGTTGTTCGACACCTGCTATGATTTGTCCGGGACGACTGAGGTGAAGGTTCCGACGGTGGTGCTGCATTTCCGGGGAGCTGACGTGTCACTCCCGGCGGGGAATTATTTGATTCCGGTGGATGATAGTGGAACGTATTGTTTTGCTTTTGCTGGAACTATGAGTGGGTTGTCTATTATTGGGAATATTCAGCAACAAGGGTTTCGGGTCGTGTTTGATTTGGCGGGTTCTCGGGTCGGGTTTGCCCCGAGAGGGTGTGCTTGA 897 0.5819 MQKTFAGVPCTSPLCRRLDTPGCNGRRRLCQYQVSYGDGSFTTGDFSTETLTFRRAAVPRVALGCGHDNEGLFIGAAGLLGLGRGKLSFPSQTGSLFSKKFSYCLADRAASSRPSSVVFGDTAVSRTARFTPLLKNPKLGTFYYVELMGISVGGSPVRGISASLFRLDRMGNGGVIIDSGTSVTRLTRPAYVALRDAFRVGSARLKRAPEFSLFDTCYDLSGTTEVKVPTVVLHFRGADVSLPAGNYLIPVDDSGTYCFAFAGTMSGLSIIGNIQQQGFRVVFDLAGSRVGFAPRGCA* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2073 298 Pfam Xylanase inhibitor N-terminal 2 121 IPR032861 -
Dod07g2073 298 SUPERFAMILY Acid proteases 3 297 IPR021109 -
Dod07g2073 298 Gene3D Acid Proteases 1 117 IPR021109 -
Dod07g2073 298 Gene3D Acid Proteases 118 298 IPR021109 -
Dod07g2073 298 Pfam Xylanase inhibitor C-terminal 143 293 IPR032799 -
Dod07g2073 298 PANTHER ASPARTYL PROTEASES 4 297 IPR001461 GO:0004190|GO:0006508
Dod07g2073 298 ProSiteProfiles Peptidase family A1 domain profile. 1 293 IPR033121 -
Dod07g2073 298 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 4 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2073 Dod-Chr7 51814039 51815718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2073 8 297 Miscellaneous Gene Families AT1G77480 27.640 1.79e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2073 K22683 - gmx:100791511 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2073 07 51814039 51815718 Dod07g2073 07 51814039 51815718 ECH
Dod01g3633 01 77650639 77652681 Dod07g2073 07 51814039 51815718 PCT