Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3633 ATGGAAGGCAAAGCGAGGAATGGCCTTGCCCTCCTCTTCTCAACGCTCATGGCCTACTTTCTCTTTCTCTCCACTGCCACCCCCACGCTCCCATCTCACTCCCAAACCCAAACGCTAGTCCTCAGCTCACTCCCACACCCGCCCACACTCTCATGGCCCGAATCCGAAGCCCTCTCGGACCCAAAACCCGACCCGGAATCCTCAACCACACTCTCACTCGACCTCCACCACATAGACGCGCTCTCCTCCAACAAAACCCCAGAGCAGCTCTTCCACATAAGGCTCCAAAGAGACAACGCCAGAGTCCAATCCCTCACCTCCATGGCCCCCAACAGGACCCGATCCCGTAGATCCGGGTCGGGTTTCAGCAGCTCAATAGTCTCGGGCCTAGCACAGGGCAGCGGCGAGTACTTCACGCGCCTCGGCGTTGGAACCCCGGCAAAGTACGTCTACATGGTCCTCGACACCGGAAGCGACGTCGTTTGGCTCCAGTGCGCCCCATGCAGAAAATGTTACACACAGGCCGACCCGGTTTTCGACCCGACAAAATCCCGCACCTTCGCCGGAATCCCCTGCGGCGCCCCGCTCTGCCGCCGGCTTGACTCTCCGGGATGCAACAGGAACAAGGTCTGCCAGTACCAGGTCTCCTACGGAGACGGTTCCTTCACGTTCGGCGATTTCTCCACCGAAACGCTGACGTTTCGAAGGAGGAGGGTTGCGCGCGTGGCTCTCGGCTGTGGCCACGACAACGAGGGCCTCTTCGTTGGCGCCGCCGGCCTGTTGGGCCTGGGCCGCGGGAGGCTGTCTTTTCCGGTCCAAATGGGCCGCCGGTTCAACTCGAAGTTCTCTTACTGCCTCGTGGACCGGTCCGCTTCTTCCAAACCGTCTTCGGTGGTTTTCGGCGACGCTGCCGTTTCGCGGACCGCTCGGTTCACTCCGCTCCTCAAGAACCCTAAGCTCGACACCTTCTACTACGTCGAGCTCCTCGGGATCAGCGTCGGCGGCGCCCCCGTCCGCGGCGTCTCCGCCTCGCTCTTCCGGATCGACGCCGCTGGGAACGGTGGCGTTATTATCGATTCGGGCACTTCCGTGACCAGACTGACCCGGCCCGCTTACGTGGCGCTGAGGGACGCTTACCGTGCGGGGGCGTCGCATCTGAAGCGGGCGCCGGAGTTCTCGCTGTTCGACACGTGCTACGACCTGTCGGGGCTGACGACGGTGCAGGTGCCGAAGCTGGTGCTGCACTTCCGTGGAGCTGACGTGTCGCTCCCGGCGTCGAACTACATGATCCCGGTGGATAGCAGCGGCAGCTTCTGCTTCGCGTTCGCCGGAACCATGAGTGGGTTGTCCATTATTGGTAACATTCAGCAGCAGGGGTTCCGGGTTGTGTACGATCTCGCGGGTTCTCGGGTCGGGTTTGCTGAAAGAGGGTGCGAGTGA 1440 0.6194 MEGKARNGLALLFSTLMAYFLFLSTATPTLPSHSQTQTLVLSSLPHPPTLSWPESEALSDPKPDPESSTTLSLDLHHIDALSSNKTPEQLFHIRLQRDNARVQSLTSMAPNRTRSRRSGSGFSSSIVSGLAQGSGEYFTRLGVGTPAKYVYMVLDTGSDVVWLQCAPCRKCYTQADPVFDPTKSRTFAGIPCGAPLCRRLDSPGCNRNKVCQYQVSYGDGSFTFGDFSTETLTFRRRRVARVALGCGHDNEGLFVGAAGLLGLGRGRLSFPVQMGRRFNSKFSYCLVDRSASSKPSSVVFGDAAVSRTARFTPLLKNPKLDTFYYVELLGISVGGAPVRGVSASLFRIDAAGNGGVIIDSGTSVTRLTRPAYVALRDAYRAGASHLKRAPEFSLFDTCYDLSGLTTVQVPKLVLHFRGADVSLPASNYMIPVDSSGSFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAGSRVGFAERGCE* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3633 479 ProSiteProfiles Peptidase family A1 domain profile. 137 474 IPR033121 -
Dod01g3633 479 PANTHER ASPARTYL PROTEASES 40 479 IPR001461 GO:0004190|GO:0006508
Dod01g3633 479 SUPERFAMILY Acid proteases 129 478 IPR021109 -
Dod01g3633 479 Pfam Xylanase inhibitor C-terminal 324 474 IPR032799 -
Dod01g3633 479 Gene3D Acid Proteases 300 479 IPR021109 -
Dod01g3633 479 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 40 479 - -
Dod01g3633 479 PRINTS Pepsin (A1) aspartic protease family signature 356 367 IPR001461 GO:0004190|GO:0006508
Dod01g3633 479 PRINTS Pepsin (A1) aspartic protease family signature 450 465 IPR001461 GO:0004190|GO:0006508
Dod01g3633 479 PRINTS Pepsin (A1) aspartic protease family signature 143 163 IPR001461 GO:0004190|GO:0006508
Dod01g3633 479 Gene3D Acid Proteases 115 299 IPR021109 -
Dod01g3633 479 MobiDBLite consensus disorder prediction 51 70 - -
Dod01g3633 479 MobiDBLite consensus disorder prediction 102 123 - -
Dod01g3633 479 CDD cnd41_like 136 478 IPR033873 -
Dod01g3633 479 Pfam Xylanase inhibitor N-terminal 137 302 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3633 Dod-Chr1 77650639 77652681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3633 100 479 Miscellaneous Gene Families AT1G77480 25.899 5.27e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3633 K22683 - gmx:100794269 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3633 01 77650639 77652681 Dod07g2073 07 51814039 51815718 PCT