Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2012 ATGGCGGGGGAAACATCATGGGTCAGCCACTACTACGATGACACACGAAGGGAGACTAGGGAGTGGGATTCATTTTCAGAAGTTGGCGAGGAAGGTGACAAAGAAGCAACTGCTGTTTCTGTGAACATGATTTTACCTGATGAATTAGTAGAACGTATCCTAGCCTATCTGCCCGTTGCTAGCATTTTCAGAGCAGGTTGTGTGTGTAAAAGATGGTATGAGATCGTCACTTCAGAAAGGTTTCTGTGGACCCTTTCCCATGTGCTGCCGCAGAAACCATGGTACTTTATGTTCACTAACTCCGATGAACCGACTGGTTATGCATTTGATCCCATCCTTAGGAAATGGTATGGCATTGAACTTCCCTGCATTGACACTTCTAATTGGTTCACTGCTTCGTCACATGGTTTGGTTTGCTTCATGTACAATGGCAGCAGAACCGAATTATGCATGTGTAACCCTATTACAAAAAGCTGCAGGAAGCTTGAGGAGCCTCCGGGTTATGCATATTCTGATTACAGTGCATTGGCAATCTCTGTGAATAGGGAATCCCACAAATATACCGTGGCAATAGTAAAATCAAGGCAAGTCCCTCATAGCTTTTTCATGTGGGATATCTCAATTCATTTATATGATTCAGACAATGCAACCTGGGCGACGGCTTTAACAGAGGTTTTGATCGGGTGGAGAGGTGGTGATGAGAGCGTGATATGCAATGGTGTGCTATATTTTTTAGTGTACTCAACCGGGGGTTGTCCGCCTGAAAGTCGCCATGCTCTAATTGCATATAATATCTCTAACTGTTCTTCTCAAGGTAGCTTGAGGAGGAGCTTTATTCCTGTTCCCTGTTCTCTAACATGTGGCCGGCTGATGAATTTGAAGGAGAAGCTTGTAATGGTGGGAGGGATTGGTAAGCAAGATCGACCTGACATAATAAAAGGGATCGGTATCTGGGTTCTAAATGATCAGAAGTGGGAAGAGATTGTGCGAATGCCTCACAAATACTTCCAAGGCTTTGGAGAGCTGGATGATGTTTTCGCTAGCAGTGGAACAGATGATCTGATATATATCCAAAGTTATGGATCTCCAGCCCTCCTCATATATGACATGAACATCAAACAATGGAAATGGTCACAGAAATGCCCTGTAGCAAAGAGGTTCCCACTGCAGCTCTTCACTGGCTTTTGCTTTGAGCCGAGGCTTGAAATTTCTCCATAG 1218 0.4433 MAGETSWVSHYYDDTRRETREWDSFSEVGEEGDKEATAVSVNMILPDELVERILAYLPVASIFRAGCVCKRWYEIVTSERFLWTLSHVLPQKPWYFMFTNSDEPTGYAFDPILRKWYGIELPCIDTSNWFTASSHGLVCFMYNGSRTELCMCNPITKSCRKLEEPPGYAYSDYSALAISVNRESHKYTVAIVKSRQVPHSFFMWDISIHLYDSDNATWATALTEVLIGWRGGDESVICNGVLYFLVYSTGGCPPESRHALIAYNISNCSSQGSLRRSFIPVPCSLTCGRLMNLKEKLVMVGGIGKQDRPDIIKGIGIWVLNDQKWEEIVRMPHKYFQGFGELDDVFASSGTDDLIYIQSYGSPALLIYDMNIKQWKWSQKCPVAKRFPLQLFTGFCFEPRLEISP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2012 405 SUPERFAMILY F-box domain 44 143 IPR036047 GO:0005515
Dod07g2012 405 ProSiteProfiles F-box domain profile. 39 85 IPR001810 GO:0005515
Dod07g2012 405 SMART fbox_2 45 85 IPR001810 GO:0005515
Dod07g2012 405 PANTHER F-BOX FAMILY PROTEIN 1 405 IPR045048 -
Dod07g2012 405 TIGRFAM F_box_assoc_1: F-box protein interaction domain 135 370 IPR017451 -
Dod07g2012 405 Gene3D - 35 85 - -
Dod07g2012 405 PANTHER BNAA09G39300D PROTEIN 1 405 - -
Dod07g2012 405 Pfam F-box-like 45 84 IPR001810 GO:0005515
Dod07g2012 405 SUPERFAMILY Galactose oxidase, central domain 107 384 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2012 Dod-Chr7 50980557 50983699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2012 - - gmx:100817678 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3577 01 77163088 77166426 Dod07g2012 07 50980557 50983699 PCT