Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3577 ATGGCGGGAGAAACATCATGGATCAGTCCCTATGATGATGACATAAGAAGGGTGACTGGGGAGTATGGTTTATTTTCAGAACCTGGTGAGGAAGGTGATAAAGAATCAACTGCTGTTTCTGTGGATCTTATTTTGCCTGATGACCTGCTGGAACGTATCCTAGCCTGTCTTCCAATTGCAAGCATTTTTAGGGCTGGTTGTGTGTGTAAGAGATGGCATGAGATTGTTACTTCGGAGAGGTTTATATGGAACCTTTCGCATGTTCTACCGCAGAAACCTTGGTACTTTATGTTTACAGGCTCTGATGAACCAATTGGTTATGCTTATGATCCCATCCTTCGGAAATGGTATGGCATTGAACTTCCATGCATTGGCACTTCTAATTGGTTCATTGCTTCATCATGTGGTATGGTTTGCGTCATGAACAGTGACAGTAGGAGTGAATTATGTGTCTGCAACCCCATTACCAAAAGCTGCAGGAAGCTTGAGGAGCCTCCAGGTTTAAAATTTTCTGATTACAGTGCACTAGCAATCTCAGTTAACAGGGAATCTCACAGTTATAGTGTGGCAATTGTGAAATCTAAACAAGTCCCTGAGGACTTTGTCCAGTGGGATATATCAATTCATATATACAATTCAGAAAATGTGACCTGGGTGACGTCCTTGACAGAGGTTTTGATTGGGTGGAGAGGTGGTGATGAGAGTGTTATATGTAATGGGGTGCTATACTTTTTGGTTTACTCAACTGGTGGTGGTCTGCCAGAAAGTCGCCATGCACTAATTGGATATAATATCTCCAACCGTTCCTCTCAAGTTAGCTTAACAAAGAACTTTATTCCAGTCCCATGTTCTCTAACATGTGGCCGACTAATGAACCTAAAGGAGAAGCTTGTAATGGTGGGAGGTATTGGCAAACCGGATCGACCTGACATAATAAAAGGAATTGGTATCTGGGTTCTAGATGATAGGAAGTGGGAAGAGATTGCTCGAATGCCCCACAAATTCTTCCAAGGCTTTGGAGAGCTCGATGATGTTTTTGCTAGCAGTGGTGCTGAAGATCTTATATATATTCAGAGTTATGGAGCTCCTCTTCTGCTTACATATGACATGAACCATAAACAATGGAAATGGTCACAGAGGTGCCCTGTGACAAAAAGGTTCCCACTGCAGCTTTTCACTGGTTTCTGCTTTGAGCCCAGGCTTGAAATTGCTCCATAG 1218 0.4278 MAGETSWISPYDDDIRRVTGEYGLFSEPGEEGDKESTAVSVDLILPDDLLERILACLPIASIFRAGCVCKRWHEIVTSERFIWNLSHVLPQKPWYFMFTGSDEPIGYAYDPILRKWYGIELPCIGTSNWFIASSCGMVCVMNSDSRSELCVCNPITKSCRKLEEPPGLKFSDYSALAISVNRESHSYSVAIVKSKQVPEDFVQWDISIHIYNSENVTWVTSLTEVLIGWRGGDESVICNGVLYFLVYSTGGGLPESRHALIGYNISNRSSQVSLTKNFIPVPCSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWVLDDRKWEEIARMPHKFFQGFGELDDVFASSGAEDLIYIQSYGAPLLLTYDMNHKQWKWSQRCPVTKRFPLQLFTGFCFEPRLEIAP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3577 405 Gene3D - 35 85 - -
Dod01g3577 405 TIGRFAM F_box_assoc_1: F-box protein interaction domain 135 339 IPR017451 -
Dod01g3577 405 PANTHER OS02G0260200 PROTEIN 2 404 - -
Dod01g3577 405 SUPERFAMILY Galactose oxidase, central domain 98 378 IPR011043 -
Dod01g3577 405 Pfam F-box-like 45 84 IPR001810 GO:0005515
Dod01g3577 405 ProSiteProfiles F-box domain profile. 45 85 IPR001810 GO:0005515
Dod01g3577 405 SUPERFAMILY F-box domain 44 143 IPR036047 GO:0005515
Dod01g3577 405 SMART fbox_2 45 85 IPR001810 GO:0005515
Dod01g3577 405 PANTHER F-BOX FAMILY PROTEIN 2 404 IPR045048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3577 Dod-Chr1 77163088 77166426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3577 - - gmx:100817678 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3577 01 77163088 77166426 Dod07g2012 07 50980557 50983699 PCT