Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1954 ATGTCAGAAACTGACTTGGCGGTTATTAAGCCTGAGATGATGAAGTCGTATGTCTGGCTTCAGACTTGTGATGGTTCAATCCAACAAGTGGAACAAGAAATTGCAATGTTTTGCCCACTGATATTTCAAGAAGTTACACAACAAAAAGGGATGGGGTCTTCCAAGAATTGTGCAATATGTCTTCCTCAGCAAGTCACCCCTGCTACATTGAGCTCAGTTCTTGATTATTGTCGATTTCATCAAGTACCAGGCCGCTCAAACAAGGAACGGAAATCTCATGATGAAAAATTCATTAAGCTGGGCACAAATAGGCTCTGTGAGTTAGTGTCTGCTGCAGACAGCCTTCAGTTAAAGCCATTGGTTGATCTTATCAGTCGTGCACTTGCCCGAAAAATTGAAGGAAGAACACCGGAGGAGATACGTGAAATATTTCATTTGCCTGATGATCTTACAGAGGAAGAGAAATTGGAGCCCTTAAAAAACATAACTGATGACCCAAGGATCAGGCTTTTGAATCGTTTATATGCCAAGAAGAGGAAAGAACTAAAAGAGCGTGAAAGGTTAAAGAATGTTGAAGTTGAAGAAGAGCGTGTAGATGAACGTTCCGTTGATGACCTTTTGTGTTTTATTAATGGAAATGATGGAGATCCAAAGGCGGGTAAAACTTCCAAGAATAAAAAGAAGAACCGGAGGAAAAAAGACCAACAAAAGAACTCTTCTTTGAAGGATGCATCCGGACCGAGTAAGAAGGAGCTAAATGGGCATAACACCGAATACCAAAGTTCCGAAGCTGATAGAATTGGCGAGACATCAAATTTACAATGTACAGAGGTTTGA 837 0.4074 MSETDLAVIKPEMMKSYVWLQTCDGSIQQVEQEIAMFCPLIFQEVTQQKGMGSSKNCAICLPQQVTPATLSSVLDYCRFHQVPGRSNKERKSHDEKFIKLGTNRLCELVSAADSLQLKPLVDLISRALARKIEGRTPEEIREIFHLPDDLTEEEKLEPLKNITDDPRIRLLNRLYAKKRKELKERERLKNVEVEEERVDERSVDDLLCFINGNDGDPKAGKTSKNKKKNRRKKDQQKNSSLKDASGPSKKELNGHNTEYQSSEADRIGETSNLQCTEV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1954 278 Pfam Skp1 family, dimerisation domain 118 155 IPR016072 GO:0006511
Dod07g1954 278 MobiDBLite consensus disorder prediction 209 278 - -
Dod07g1954 278 Pfam Skp1 family, tetramerisation domain 18 81 IPR016073 GO:0006511
Dod07g1954 278 PANTHER SKP1-LIKE PROTEIN 20 1 262 - -
Dod07g1954 278 SUPERFAMILY Skp1 dimerisation domain-like 92 161 IPR036296 GO:0006511
Dod07g1954 278 SUPERFAMILY POZ domain 16 81 IPR011333 -
Dod07g1954 278 Gene3D Potassium Channel Kv1.1; Chain A 12 162 IPR011333 -
Dod07g1954 278 SMART skp1_3 15 117 IPR001232 GO:0006511
Dod07g1954 278 Coils Coil 171 191 - -
Dod07g1954 278 PANTHER SKP1 1 262 IPR016897 GO:0006511
Dod07g1954 278 MobiDBLite consensus disorder prediction 240 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1954 Dod-Chr7 50068632 50074820 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1954 - - gmx:100794666 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1954 07 50068632 50074820 Dod07g1954 07 50068632 50074820 ECH
Dod07g1954 07 50068632 50074820 Dod01g0748 01 13429218 13435876 ECH
Dod01g0748 01 13429218 13435876 Dod07g1954 07 50068632 50074820 PCT