Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1953 ATGGTTCCACATGGTGTTACATGCACTGTGGCCCTTGTGTTCATGCTTGCAGCCACTTTGGCTTTTGCTGGGGACATAGTTCACCATGATGATGTTGCTCCAAGGAGGCCTGGTTGTGAGAACAACTTTGTCCTGGTCAAAGTCCCCACTTGGATTGATGGTGTGGAAAACAGTGAGTATGTTGGTGTCGGTGCAAGATTCGGCCCTACGCTGGAGTCGAAGGAGAAACGTGCCAACCATACTAGAGTTGTCATGGCTGACCCTCCTGATTGTTGTTCCAAGCCTAAGAATAAGCTCACCAATGAGATCATTTTGGTACATCGAGGAAAATGTAGTTTCACAAAAAAGGCGAATACAGCTGAAGAAGCTGGCGCTTCAGCCATCCTCATTATAAACTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGAAAATGAAACTGATGTTGACATTGGAATACCTGCTGTCATGCTTCCCCAAGATGCTGGACTAAACTTGGAAAAGCATATAAAAAACAACTCCACAGTGTCCATGCAGTTATACTCTCCACTGCGTCCATTGGTTGATGTTGCGGAAGTGTTTCTGTGGCTTATGGCTGTTGGTACAATTTTATGTGCTTCTTATTGGTCTGCTTGGACTGCCAGAGAAGCAGCTATCGAGCAAGAGAAGCTATTAAAGGATGCTTCAGATGAATATGTTAATGCAGAGAATATTCGTTCCAGTGGTTATGTGGAAATCAGTACTGCAGCAGCAATTTTATTTGTTGTGATTGCTTCTTGTTTCCTGGTTATGCTGTACAAATTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTATTTTGCATTGGTGGAATAGAGGGACTGCAAACTTGCTTGGTGGCTCTTTTATCATGTTTCAGATGGTTTCAACATGCTGCACAAGCATTTGTGAAAATTCCTTTCTTTGGGGCTGTATCATATCTGACGCTTGCCGTTACCCCCTTTTGCATAGTATTTGCCGTTATTTGGGCAGTTCATCGCCGTACATCGTTTGCTTGGATTGGTCAAGATATTCTTGGTATCGCATTGATAATTACCGTTCTTCAGATTGTTCGCATACCAAATCTCAAGGTTGGAACTGTTCTCCTCAGTTGTGCCTTCCTATATGACATCTTCTGGGTGTTTGTTTCTAAACGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGCGATAAGAGTGGAGAAGATGGTATCCCCATGCTACTAAAGATACCGCGTTTGTTTGATCCTTGGGGTGGTTACAGCATCATTGGTTTTGGGGACATAATCCTACCGGGGCTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCGAAGAAGAGCCTTCGTGCAGGATACTTCTTGTGGGCAATGTCTGCTTATGGTTTAGGTCTCCTCATCACATATGTGGCTTTGAACTTGATGGATGGGCATGGCCAACCAGCTTTGCTTTATATTGTCCCATTTACACTTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAGCTCAAGATTTTGTGGACAAGAGGGGAACCAGAAAGGCTTTGCCCTCACATGCAAGAGGATCAACAATCAGATAACCAGCATTGA 1623 0.4368 MVPHGVTCTVALVFMLAATLAFAGDIVHHDDVAPRRPGCENNFVLVKVPTWIDGVENSEYVGVGARFGPTLESKEKRANHTRVVMADPPDCCSKPKNKLTNEIILVHRGKCSFTKKANTAEEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQDAGLNLEKHIKNNSTVSMQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAIEQEKLLKDASDEYVNAENIRSSGYVEISTAAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGIEGLQTCLVALLSCFRWFQHAAQAFVKIPFFGAVSYLTLAVTPFCIVFAVIWAVHRRTSFAWIGQDILGIALIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKRWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKSLRAGYFLWAMSAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERLCPHMQEDQQSDNQH* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1953 540 Coils Coil 218 238 - -
Dod07g1953 540 Gene3D - 39 183 - -
Dod07g1953 540 PANTHER SIGNAL PEPTIDE PEPTIDASE 7 539 IPR007369 GO:0004190|GO:0016021
Dod07g1953 540 Pfam PA domain 89 166 IPR003137 -
Dod07g1953 540 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 7 539 - -
Dod07g1953 540 SUPERFAMILY PA domain 96 176 IPR046450 -
Dod07g1953 540 Pfam Signal peptide peptidase 243 522 IPR007369 GO:0004190|GO:0016021
Dod07g1953 540 SMART psh_8 242 511 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1953 Dod-Chr7 50060159 50068362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1953 K09597 - gmx:100795197 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1953 07 50060159 50068362 Dod07g1953 07 50060159 50068362 ECH
Dod01g0749 01 13438443 13444714 Dod07g1953 07 50060159 50068362 PCT