Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0749 ATGGTTTCAGTTGGAGGTGGTGTGTGGTGCAGTGTTTTGATGGTTGTGGTTGTCAGCTTGAGTCATGCTGGTGACATAGTACACCCTGATAATATTGCTCCCAAGAGGCCTGGTTGTGACAACAGCTTTGTTCTGGTTAAAGTCCCAACTTGGATTGATGGTGTGGAAACCTGCGAGTATGTTGGTGTCGGTGCAAGATTTGGCCCCACGTTGGAATCTAAAGAAAGACATGCCAACCATACTAGAGTTGCTATTGCTGACCCTCCTGATTGTTGTAGCAAGCCTAAGAATAAGCTCACTGGCGAGATCATTTTGGTGCACCGCGGACAATGTAGTTTCACAGCCAAGGCAAACATAGCTGAAGAAGCTGGTGCTTCAGCAATCCTCATTATAAATTACCATACAGAGCTTTTCAAGATGGTTTGTGAAGACAATGAAACTGATATTGATATTGGAATTCCTGCTGTCATGCTTCCACAAGATGCTGGCGAAAACTTGGAAAATCATATACGGAAAAATTCCACAGTGTCTGTGCAGTTATACTCTCCACTGCGCCCATTAGTTGATGTTGCAGAAGTGTTTTTATGGCTTATGGCTGTTGGTACCATTCTCTGTGCTTCTTATTGGTCTGCCTGGACTGCCAGAGAGGCTGCCGTTGAGCGGGAGAAGCTATTAAAGGATGCTTCGGATGAATATTTGATTATAGAGAACGGTGGTTCCAGTGGTTATGTAGAAATCAGTACTGCAGCAGCAATTTCATTTGTTGTGGTTGCTTCTTGTTTCTTGGTTATGCTGTACAAATTAATGGCATCCTGGTTCATTGAAGTTCTGGTGGTTCTGTTTTGCATTGGTGGTGTTGAGGGACTCCAAACTTGCTTGGTAGCTCTCTTATCATGTTTCAGATGGTTTCAACCTGCTGGGCAAACCTTTGTTAAAGTACCCTTCTTTGGAGCTGTCTCGTATCTGACACTTGCTGTTACCCCCTTCTGCATAGCATTTGCCGTGGTTTGGGGTGTTTTTCGCCATGTATCGTTTGCTTGGATTGGACAAGATATTCTTGGAATCACATTGATCATTACAGTTCTTCAGATTGTCCGCATACCGAATCTCAAGGTTGGAACTGTTCTTCTTAGTTGTGCCTTCCTATATGACATCTTCTGGGTGTTCGTCTCTAAGTGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCGCGAGGTGATAGGAGTGGAGAAGATGGTATCCCCATGCTACTCAAGATACCGCGTTTGTTTGATCCTTGGGGCGGTTACAGCATCATCGGTTTTGGGGACATAATCTTACCAGGGCTTCTAGTAGCATTTTCACTAAGGTATGACTGGTTGGCAAAGAAGAACCTTAGGTCTGGATACTTCTTATGGGCAATGAGTGCTTATGGTTTAGGTCTTCTCATCACATATGTGGCTTTGAACTTGATGGATGGGCATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTCGGCACCTTTTTGTCACTGGGAAAGAAGAGAGGTGAACTCAAGGTATTATGGACAAGAGGGGAACCAGAAATGCCTTGCCTCCACAATCAAGAGGGTCAACAATCAATGCACCAGTAA 1620 0.4432 MVSVGGGVWCSVLMVVVVSLSHAGDIVHPDNIAPKRPGCDNSFVLVKVPTWIDGVETCEYVGVGARFGPTLESKERHANHTRVAIADPPDCCSKPKNKLTGEIILVHRGQCSFTAKANIAEEAGASAILIINYHTELFKMVCEDNETDIDIGIPAVMLPQDAGENLENHIRKNSTVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAVEREKLLKDASDEYLIIENGGSSGYVEISTAAAISFVVVASCFLVMLYKLMASWFIEVLVVLFCIGGVEGLQTCLVALLSCFRWFQPAGQTFVKVPFFGAVSYLTLAVTPFCIAFAVVWGVFRHVSFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDRSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRSGYFLWAMSAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKVLWTRGEPEMPCLHNQEGQQSMHQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0749 539 Pfam Signal peptide peptidase 243 522 IPR007369 GO:0004190|GO:0016021
Dod01g0749 539 Gene3D - 42 183 - -
Dod01g0749 539 Pfam PA domain 89 166 IPR003137 -
Dod01g0749 539 PANTHER SIGNAL PEPTIDE PEPTIDASE 12 538 IPR007369 GO:0004190|GO:0016021
Dod01g0749 539 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 12 538 - -
Dod01g0749 539 SUPERFAMILY PA domain 98 138 IPR046450 -
Dod01g0749 539 SMART psh_8 242 511 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0749 Dod-Chr1 13438443 13444714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0749 K09597 - gmx:100808921 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0749 01 13438443 13444714 Dod07g1953 07 50060159 50068362 PCT