Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1946 ATGGACAATTCATCAAACTTTGATGAAAACTCTGATGTGGGGTATCAGCCTTCAACTTCTTCTGTGGATCAAAATGATCATTCAATCACTGAGACTCCTGGATACTCCCCATTCAGTGGGGACTCCTTTGCATACTGCAGGAGTAACTCAGAGGCCTCAGTCATCTCATCTGAGCCTATAGATGACAACAGCTTCTTTGCTAGTGAACCTTCACCTTCTCTGTGGATGGATGCAGCAAAACCTGCTGGGGCTAGTCAAGCTGCTGCTCTTTCAAGGCTGGGAATGAAGCAGCACAGGCATTCATTGGATGATAAATCTGATGATCTTGACATCTTGGAATCAGAGCTTGAAATGATGAAGGAAAGATTTGCAAAGCTTCTACTTGGGGAAGACATGTCTGGTGGTGGGAAAGGTGTATGCACTTCAGTTACAATCTCAAATTCCATTACCAACCTCTATGCTACTGTTTTTGGACAAAATCTAAAGTTGGAGCCTCTTAAGCCTGAGAAGAAGGCTATGTGGAGAAGGGAAATGAATTGTCTCCTATCAGTGTGTGATTACATAGTAGAATTTGCCCCAACTGCACAATACTTAGATGATGGCACAATTGTAGAGATGATGACAAGCAGACCAAGATCAGATATTTATATAAACCTGCCGGCTTTGCAGAAGCTTGACACAATGCTTATAGAAATATTAGACAGTTTCCAGGACACTGAATTTTGGTATGCTGAGCAAGGGAGCATGTCAGGGAATTCTGCTCGTTCGCGAGCCGGATCGTTTCGAAGAATTGTTCAGAGGAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTGTTCACTCTGGTGGCCTCTCAGATAAGTCAAGGAAGCACTTGATTGAGAAAAGAGACTGTGCCTCTCAAATTCACAAAGCTGCCATGGCAATAAATAGCAGTGTTCTTGCAGAGATGGATATCCCTGAGACATACATGGCAAATCTTCCCAAGAGTGGAAGAGCAAGCCTTGGGGACACAATCTACCGCTATATGTGTGCTGCTGACAAGTTCTCACCAGACAACCTTCTTGACTGCCTCAAACTAAGTTCTGAGCATGAAGCACTTGAGCTGGCAGACAGGGTTGAATCTTCAATGTACACGTGGAGGCGCAAGGCTTGTCTAAGCCATTCAAAATCATCATGGAACAAAGTAAAGGACCTAATGGCTGAGACAGACCGGAATGACAAAAACTACCTCTTGGCTGTGAGAGCTGAGACTTTGTTGTTTTGCTTGAAGCAAAGATATCCTGAACTTTCACAAACTTCCTTGGACACATGCAAAATTCAATACAATCGGGATGTAGGGAAAGCAATACTAGAGAGCTACTCAAGAGTATTAGAGGGCTTAGCATTCAACATTGTTGCTTGGACTGAAGATGTTCTTTATGCAGATAAATCAATGAGGAACCAAGATGTATAG 1455 0.4323 MDNSSNFDENSDVGYQPSTSSVDQNDHSITETPGYSPFSGDSFAYCRSNSEASVISSEPIDDNSFFASEPSPSLWMDAAKPAGASQAAALSRLGMKQHRHSLDDKSDDLDILESELEMMKERFAKLLLGEDMSGGGKGVCTSVTISNSITNLYATVFGQNLKLEPLKPEKKAMWRREMNCLLSVCDYIVEFAPTAQYLDDGTIVEMMTSRPRSDIYINLPALQKLDTMLIEILDSFQDTEFWYAEQGSMSGNSARSRAGSFRRIVQRKDEKWWLPVPCVHSGGLSDKSRKHLIEKRDCASQIHKAAMAINSSVLAEMDIPETYMANLPKSGRASLGDTIYRYMCAADKFSPDNLLDCLKLSSEHEALELADRVESSMYTWRRKACLSHSKSSWNKVKDLMAETDRNDKNYLLAVRAETLLFCLKQRYPELSQTSLDTCKIQYNRDVGKAILESYSRVLEGLAFNIVAWTEDVLYADKSMRNQDV* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1946 484 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 328 IPR038937 GO:0005085
Dod07g1946 484 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 328 484 IPR038937 GO:0005085
Dod07g1946 484 Gene3D PRONE domain, subdomain 1 109 350 - -
Dod07g1946 484 Gene3D PRONE domain, subdomain 1 351 484 - -
Dod07g1946 484 MobiDBLite consensus disorder prediction 1 37 - -
Dod07g1946 484 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 114 480 IPR005512 GO:0005085
Dod07g1946 484 ProSiteProfiles PRONE domain profile. 106 484 IPR005512 GO:0005085
Dod07g1946 484 Coils Coil 484 484 - -
Dod07g1946 484 Coils Coil 95 122 - -
Dod07g1946 484 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 328 - -
Dod07g1946 484 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 328 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1946 Dod-Chr7 49942022 49946144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1946 - - gmx:100785956 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0757 01 13592178 13596055 Dod07g1946 07 49942022 49946144 PCT