Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0757 ATGTCATGCTTTAATAGCCTAGTGTTGAGGAAGTTGATCACAGATTCTTGTGCTAAGATGGACAAAATATCAAACTTCGATGAAAATTCTGATGTGGGTTGTTATCACCCTTCTTCTCCTTATGTGGATCATTCAGCCACTGATGCCTGGACAAACTCAGAAGCATCAAACATGTCAGAGTCCATGGATGACAGTAGTTATGTCAGCGAGTCTTCACCATCTCGGTGGACTGCGGCGGCAAAACCAGGTAGTAAACAAGCCGTTATTTCCAGGCTAGGAATGAAGCTGCGCAAGAATTCGGTACTGGATGCTAAGTTGGATGAGTGTGATCTTTTGGATTCAGGTGAGATTGAAATGATGATGGAAAGATTCTCAAAGCTTCTGCTGGGAGAAGACATGTCTGGTGGTGGGAAAGGTGTTTGCAGTGCAGTTACAATCTCAAATGCCATTACCAATCTCTATGCAACTGTATTTGGACAAAGTTTAAAGTTGGAGCCACTGAAACCTGAGAAGAAGGCTATGTGGAAAAGGGAAATGAAGGTTCTTCTATCAGTGTGTGATTACATAGTAGAATTTGCACCAACTGCACAATATTTAGAAGATGGCACTATTGTGGAGATGATGAAAAGCAGACCAAGGTCAGACATTTATATCAACCTCCCTGCATTGCAGAAGCTTGACACAATGCTCATTGAAATATTGGATACCTTCCAGGATACTGAATTTTGGTATGCAGATAACACACCGGCGAATTCACCTCGCACGCGTGCAGCCTCATTCCGAAGGATTGTTCAGCGAAAGGGCGAGAAATGGTGGCTGCCAGTGCCTTGTGTTCTCCCTGGTGGCCTCTCTGATAAGTCAAGGAAGCATTTGATAGAGAAAAGGGATTGTGCTAATCAAATTCATAAAGCAGCCATGGCAATAAATAACAATGTCCTTGCTGAGATTGATATCCCAGAAAGCTATATTGATAATCTTCCCAAGCTGAAATTCTATAGCCACGTGATTGAGGATCCCGTTAAATGTGACCCCTTAAGGCAAATGTCTTGGAATTTTTCATCAAATTTCATAAGCCTTTTATGGAAGCCAATAATAGCAGCTGAGACTTGTAGAAAACGGGATGATATAATTTCATATAAGAGTGGAAGAACAAGTATGGGGGACACAATTTACCACTATATGAATGCTGCAGAAAAGTTCTCTCCTGATCAGCTTCTTGACTACCTCAAAATAAGTTCTGAACATGAAGCACTTGAGCTAGCAGACAGGGTTGAGTCATCAATGTACTCATGGAGGCGAAAAGCTTGCCTGAGCCATTCACAAACATCATGGAGCAAAGTAAAGGATCTCATGGCTGACACCGACCGAAAGGACAAAAACTACACGTTAGCTGAGAGAGCTGAGAGTTTATTGTTCTGTCTGAAGCAGAGATATCCTGAGCTTTCGCAAACTTCTTTGGACACATGCAAGATTCAGTACAACAGGGATGTTGGAAAAGCAGTATTAGAGAGTTATTCAAGAGTGTTGGAAGGCCTAGCATTCAATATTGTTGCCTGGATTGAAGATGTTCTTTATGTAGATAATTCAATGAGGAACCGAGATGTCTAG 1608 0.4185 MSCFNSLVLRKLITDSCAKMDKISNFDENSDVGCYHPSSPYVDHSATDAWTNSEASNMSESMDDSSYVSESSPSRWTAAAKPGSKQAVISRLGMKLRKNSVLDAKLDECDLLDSGEIEMMMERFSKLLLGEDMSGGGKGVCSAVTISNAITNLYATVFGQSLKLEPLKPEKKAMWKREMKVLLSVCDYIVEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILDTFQDTEFWYADNTPANSPRTRAASFRRIVQRKGEKWWLPVPCVLPGGLSDKSRKHLIEKRDCANQIHKAAMAINNNVLAEIDIPESYIDNLPKLKFYSHVIEDPVKCDPLRQMSWNFSSNFISLLWKPIIAAETCRKRDDIISYKSGRTSMGDTIYHYMNAAEKFSPDQLLDYLKISSEHEALELADRVESSMYSWRRKACLSHSQTSWSKVKDLMADTDRKDKNYTLAERAESLLFCLKQRYPELSQTSLDTCKIQYNRDVGKAVLESYSRVLEGLAFNIVAWIEDVLYVDNSMRNRDV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0757 535 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 535 IPR038937 GO:0005085
Dod01g0757 535 MobiDBLite consensus disorder prediction 55 79 - -
Dod01g0757 535 ProSiteProfiles PRONE domain profile. 107 535 IPR005512 GO:0005085
Dod01g0757 535 Gene3D PRONE domain, subdomain 1 112 349 - -
Dod01g0757 535 Gene3D PRONE domain, subdomain 1 494 528 - -
Dod01g0757 535 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 116 328 IPR005512 GO:0005085
Dod01g0757 535 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 380 531 IPR005512 GO:0005085
Dod01g0757 535 Gene3D PRONE domain, subdomain 2 380 493 - -
Dod01g0757 535 MobiDBLite consensus disorder prediction 55 80 - -
Dod01g0757 535 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 20 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0757 Dod-Chr1 13592178 13596055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0757 - - adu:107485793 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0757 01 13592178 13596055 Dod01g0757 01 13592178 13596055 ECH
Dod01g0757 01 13592178 13596055 Dod07g1946 07 49942022 49946144 PCT