Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1939 ATGAGTTCTTGTGTAGAGGCGGCAGAGTATGTTGCTCGTGAGGGTGAGCCTGGGGATGGCGTTTACTTCATATGGGAAGGAGAGGCTGAGGTTGTTGGATCTGTTAGTGCCAATGATGAAAATCGCCCAGAGTTTCAATTGAAAAAATATGACTACTTTGGTTACGGTGGTTTATCAAATACAGTTCACCAGGCAGATGTAATCGCTTTGTCTAAGCTGACATGCTTAGTGCTGCCCCATGAGCACTTGGCACTGCTGCAGCCTAAGTCTATCTGGAGTGCAGAGAAATCTACTGAAACATGCTCACCTTTGGAGACTATATTGCATTTGGAACCCATAGAGGTAGATGTCTTCAAAGGAATCACTCCTCCTGATGCTCCAAGATTTGGAAATGTGTTTGGGGGACAGTTCGTTGGACAGGCACTGGCTGCAGCAACAAAATCGGTTGACTGTATTAAGCTTGTTCATAGTTTGCATTCTTATTTTCTTCGTGGGGGGGATATATACGTGCCAATTATATATAAAGTGCACCGTATCCGTGATGGAAAGAGCTTTGCTGTGCGGAAAGTTGATGCAGTTCAGAAGGGAAATGTCATATTCACTTTGATGGCTTCGTTTCAAAAAGAAGAAGAATCAGGGTTTGATCATCAGGAAGTAGCTATGCCATCTTGCCCTCCTCCAGATATGCTTCTGCCTATGGAAGAGCTACGGGAGAGACGTCTCATTGACCCTCGTTTCCCAGTAGCTTACCGGAAAAAAATCGCTACAACTAAATTCGTCCCTTGGCCCATTGATATACGGTTCTGTGAACCTAGAATGTCAATCTCAACAAGTCAGACAAAATCTCCTCCCAGTTTGAATTTCTGGTTTAGAGCTAAAGGAAAACTTGCAGATGATCAGGCCTTGCATAGGTGTGTGGTGGCATATGCTTCAGATCTATTATTTGTTCAAGTAGCTTTGAATCCCCACCGGGGAAAGGGTTTAAGGGCAAGCGCTCTTAGTCTGGATCACTCGATATGGTTTCACCGACCTGTAAGAGCTGATGACTGGTTGCTATATATGATGTTTAGTCCTAGTGCCCATAGTACACGTGGCTTTGTCACAGGCCAGATGTTCAATCAAAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGCCTAATTAGGAAGAAGGTTAATACCCAAAGTTCTGCCACTAAATCCAAGTTATAA 1212 0.4398 MSSCVEAAEYVAREGEPGDGVYFIWEGEAEVVGSVSANDENRPEFQLKKYDYFGYGGLSNTVHQADVIALSKLTCLVLPHEHLALLQPKSIWSAEKSTETCSPLETILHLEPIEVDVFKGITPPDAPRFGNVFGGQFVGQALAAATKSVDCIKLVHSLHSYFLRGGDIYVPIIYKVHRIRDGKSFAVRKVDAVQKGNVIFTLMASFQKEEESGFDHQEVAMPSCPPPDMLLPMEELRERRLIDPRFPVAYRKKIATTKFVPWPIDIRFCEPRMSISTSQTKSPPSLNFWFRAKGKLADDQALHRCVVAYASDLLFVQVALNPHRGKGLRASALSLDHSIWFHRPVRADDWLLYMMFSPSAHSTRGFVTGQMFNQKGELLVSLVQEGLIRKKVNTQSSATKSKL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1939 403 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 219 390 IPR029069 -
Dod07g1939 403 PANTHER ACYL-COA THIOESTERASE 28 403 IPR003703 GO:0006637|GO:0047617
Dod07g1939 403 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 100 212 IPR029069 -
Dod07g1939 403 CDD CAP_ED 4 88 IPR000595 -
Dod07g1939 403 ProSiteProfiles cAMP/cGMP binding motif profile. 1 54 IPR000595 -
Dod07g1939 403 Pfam Cyclic nucleotide-binding domain 5 83 IPR000595 -
Dod07g1939 403 Gene3D - 98 392 IPR042171 -
Dod07g1939 403 CDD Thioesterase_II_repeat2 116 208 - -
Dod07g1939 403 Gene3D Jelly Rolls 3 97 IPR014710 -
Dod07g1939 403 CDD Thioesterase_II_repeat1 288 388 - -
Dod07g1939 403 PANTHER ACYL-COA THIOESTERASE 28 403 - -
Dod07g1939 403 TIGRFAM tesB: acyl-CoA thioesterase II 108 389 IPR003703 GO:0006637|GO:0047617
Dod07g1939 403 SUPERFAMILY cAMP-binding domain-like 6 86 IPR018490 -
Dod07g1939 403 Pfam Thioesterase-like superfamily 130 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1939 Dod-Chr7 49882157 49896913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1939 8 403 Acyl Lipid Metabolism Gene Families AT1G01710 64.899 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1939 K01068 - gmx:100803260 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1939 07 49882157 49896913 Dod07g1939 07 49882157 49896913 ECH
Dod01g0762 01 13973023 13979643 Dod07g1939 07 49882157 49896913 PCT