Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0762 ATGGCCAAGACAGAAGAAGAAGTGTTTGAGTTCCTCGGATGTGTTCCTCTGCTACAGCGGCTTCCTAGCTCGTCCGTGAGGAAGATATCTCAACTTGTGGTCCTCAAACACTACGAGCCAAGAGAGTATGTTGTTCGTGAGGGTGAACCTGCAGATGCTCTTTACTTCATATTTGACGGAGAGGCTGAGGTTGTTGGATCTGTTAGTGCCAATGATGAAAATCATCCAGAGTTTCTATTGAAAAGATATGACTATTTTGGTTTTGGTATAGCAAATGCAGTTCACCATGCTGATGTTGTAGCTTTGACTAAGTTGTCATGCTTAGTGCTGCCCCATGAGCACTCGGCACTGCTGCAGTCAAAGTCTATATGGAATGCAGAAAAATCTCTTGATACATGCTCACCTGTGGAGAATATATTGCATTTGGAACCTATAGAGGTAGATATCTTCCGAGGAATCACCCCTCCAGATGCTCCAAAATTTGGGAAGGTGTTTGGGGGACAGATGGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCACAGCCTGCATTCCTATTTTCTTCTTGTGGGGGATTTTAACATGCCAATCATATATCAAGTTCACCGTATCCGTGATGGGAAGAGCTTTGCTACAAGGAGAGTGGATGCAATTCAAAAGGGAAATGTCATTTTCACTTTGATGGCTTCATTTCAAAAAGAAGAATTGGGGTTTCAACACCAGGAAGTAGCTATCCCATCAGTCCCTGTTCCAGATGAGCTTCTGTCAATGGAAGAGCTACGGGAGCAGCGTCTTACTGACCCTCGTCTTCCAAGAACTTACCGGAACAAGGTTGCTACAACTGAATTCATTCCCTGGCCCATAGAGATACGGTTCTGTGAACCTAAAACTTCAACAAATCAGACCAAATCTCCTCCCAGCTTGAGATACTGGTTTAGAGCAAAGGGGAGACTTTCGGATGACCAGGCCTTGCATAGGTGTGTGGTGGCATATGCTTCCGATCTAATATTTCTTCAAGTAAGTGTGAATCCCCATCGTCGGAAGGACTTAAAGGCACGTGCTGTGAGTCTGGATCACTCGATGTGGTTTCATCGCCTTCTAAGAGCTGATGATTGGGTGCTGTTTGTGATCTTTAGTCCTAGTGCCTCCAATGCACGTGGGTATGTCTCAGGCCAAATGTTCAATCAGAAGGGAGAGCTCCTTGTATCATTGGTCCAAGAAGGTCTGATGAGACGTGTTAATTCCCCAAATTCAGCCATCAAGTCTAAGTTGTGA 1296 0.4483 MAKTEEEVFEFLGCVPLLQRLPSSSVRKISQLVVLKHYEPREYVVREGEPADALYFIFDGEAEVVGSVSANDENHPEFLLKRYDYFGFGIANAVHHADVVALTKLSCLVLPHEHSALLQSKSIWNAEKSLDTCSPVENILHLEPIEVDIFRGITPPDAPKFGKVFGGQMVGQALAAASKSVDCLKVVHSLHSYFLLVGDFNMPIIYQVHRIRDGKSFATRRVDAIQKGNVIFTLMASFQKEELGFQHQEVAIPSVPVPDELLSMEELREQRLTDPRLPRTYRNKVATTEFIPWPIEIRFCEPKTSTNQTKSPPSLRYWFRAKGRLSDDQALHRCVVAYASDLIFLQVSVNPHRRKDLKARAVSLDHSMWFHRLLRADDWVLFVIFSPSASNARGYVSGQMFNQKGELLVSLVQEGLMRRVNSPNSAIKSKL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0762 431 PANTHER ACYL-COA THIOESTERASE 53 431 - -
Dod01g0762 431 CDD CAP_ED 17 114 IPR000595 -
Dod01g0762 431 Pfam Cyclic nucleotide-binding domain 36 113 IPR000595 -
Dod01g0762 431 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 133 242 IPR029069 -
Dod01g0762 431 SMART cnmp_10 17 134 IPR000595 -
Dod01g0762 431 ProSiteProfiles cAMP/cGMP binding motif profile. 17 87 IPR000595 -
Dod01g0762 431 CDD Thioesterase_II_repeat2 148 240 - -
Dod01g0762 431 Gene3D Jelly Rolls 1 128 IPR014710 -
Dod01g0762 431 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 250 418 IPR029069 -
Dod01g0762 431 SUPERFAMILY cAMP-binding domain-like 7 114 IPR018490 -
Dod01g0762 431 TIGRFAM tesB: acyl-CoA thioesterase II 140 418 IPR003703 GO:0006637|GO:0047617
Dod01g0762 431 Pfam Thioesterase-like superfamily 162 417 - -
Dod01g0762 431 CDD Thioesterase_II_repeat1 315 417 - -
Dod01g0762 431 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 44 60 IPR018488 -
Dod01g0762 431 PANTHER ACYL-COA THIOESTERASE 53 431 IPR003703 GO:0006637|GO:0047617
Dod01g0762 431 Gene3D - 131 420 IPR042171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0762 Dod-Chr1 13973023 13979643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0762 6 431 Acyl Lipid Metabolism Gene Families AT1G01710 68.545 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0762 K01068 - gmx:100781122 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0762 01 13973023 13979643 Dod01g0762 01 13973023 13979643 ECH
Dod01g0762 01 13973023 13979643 Dod07g1939 07 49882157 49896913 PCT