Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1913 ATGTGGAAGCTGGCACGATTCGCCGCGTCCGGTGTTGCCCTATCGCCGCTGCGGCGGTTGTTGTCGACGACTGCGGCGGCGATTCCGGGGCCTTGCATTGTTCACAAGCGCGGTGCCGACATCCTCCACGATCCCTGGTTCAACAAGGATACTGGGTTTCCTTTGACCGAAAGGGATCGATTGGGGCTTAGGGGTCTCCTTCCTCCCCGTGTCATTTCATTTGAGCAGCAATATGATCGCTTCATGGATTCATTCCGATCTTTGGAGAAGAATACTCAGGGCCAACCAGATAAAGTTGTTTCCCTAGCCAAATGGAGGATCCTAAATAGATTGCACGACAGGAATGAGACTTTGTACTACAGAGTTCTTATTGATAATATTAAGGAGTTTGCTCCGATAATATATACACCTACAGTTGGATTAGTGTGTCAAAATTATTCAGGTTTATTTAGACGTCCACGTGGAATGTATTTTAGTGCCAGAGATAAGGGAGAGATGATGTCAATGATCTATAACTGGCCAGCTCATCAGACATTCCTCTTGAGGGAGGTTGTGTATGTTTCTGAAAAAAACAGGGAAACATGGGAGGTAGACATGATTGTCTTGACAGATGGTAGTCGAATTCTTGGCTTAGGTGACCTTGGAGTTCAGGGCATTGGAATTCCAATAGGAAAACTTGATATATATGTTGCTGCTGCTGGTATCAACCCACAAAGAATACTTCCAGTCATGCTAGATGTTGGAACCAACAATCAGAAGCTACTTGAAAATCGTCTTTATTTAGGACTTCGACAACCAAGGTTGGAAGGTGAAGAATATCTATCAGTCGTGGATGAATTCATGGAAGCTGTTAATGCTCGATGGCCTAAAGCTATTGTGCAGTTCGAGGATTTTCAAATGAAGTGGGCTTTTGCTACCCTGGAACGATATCATAAAAGGTTCTGCATGTTTAATGATGATATACAGGGCACTGCTGGTGTTGCGCTTGCTGGATTATTAGGAACTGTAAGAGCTCAAGGTCGACCATTGTCTGATTTTGTGAACCAAAAGATAGTTGTGGTTGGGGCTGGGAGTGCAGGGCTTGGTGTTCTGAAAATGGCCATCCAGTCAGTTTCAAAGATGTTAGGGTGCAGTGAATCAGCTGCCAAAAGTCAATTCTTTTTGATTGATAAAGATGGTCTTGTCACAACAGAAAGGAGCAATCTTGATCCAGCTGCAGCTCCATTTGCTAAAAACCCAAGAGACATAGAGGGGCTTACTGAGGGTGCTAGTATAATTGAAGTGGTGAAGAAAGTTAAACCACATGTGATCCTTGGTTTGTCTGGGGTTGGAGGTATTTTCAGTGAAGAGGTGCTTAAGGCAATGAGAGAATCTGTTTCAACAAAACCTGCTATCTTTGCCATGTCTAATCCCACCATGAATGCTGAGTGCACTGCTATTGATGCTTTTAATCATGCTGGAGAAAACATAGTGTTTGCTAGTGGAAGCCCTTTCGAAAATGTAGATCTTGGTAATGGCCAAGTGGGCCATGTAAATCAAGCAAACAACATGTACTTGTTTCCAGGAATTGGTTTGGGAACACTCTTATCTGGTGCTCGGCTTATAACCGGTGGAATGTTGCAGGCAGCTGCTGAATGCCTTGCTTCATACATGTCAGAGGAAGATATCTTAAAAGGAATCTTGTATCCATCCATTGACAGCATACGGAATGTAACAGCAGATGTTGGGGCTGCTGTGCTTCGGGCTGCAGTTGAAGAAGAGCTGGCAGAAGGACATGGCGATGTAGGGTCCAAAGAACTCGCACACATGTCAAAAGAAGAGACCGTGGAGTACGTCCGAAGCAATATGTGGTACCCTGTTTATTCTCCTCTTGTTCATGAAAAATAA 1887 0.443 MWKLARFAASGVALSPLRRLLSTTAAAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYDRFMDSFRSLEKNTQGQPDKVVSLAKWRILNRLHDRNETLYYRVLIDNIKEFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSARDKGEMMSMIYNWPAHQTFLLREVVYVSEKNRETWEVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDIYVAAAGINPQRILPVMLDVGTNNQKLLENRLYLGLRQPRLEGEEYLSVVDEFMEAVNARWPKAIVQFEDFQMKWAFATLERYHKRFCMFNDDIQGTAGVALAGLLGTVRAQGRPLSDFVNQKIVVVGAGSAGLGVLKMAIQSVSKMLGCSESAAKSQFFLIDKDGLVTTERSNLDPAAAPFAKNPRDIEGLTEGASIIEVVKKVKPHVILGLSGVGGIFSEEVLKAMRESVSTKPAIFAMSNPTMNAECTAIDAFNHAGENIVFASGSPFENVDLGNGQVGHVNQANNMYLFPGIGLGTLLSGARLITGGMLQAAAECLASYMSEEDILKGILYPSIDSIRNVTADVGAAVLRAAVEEELAEGHGDVGSKELAHMSKEETVEYVRSNMWYPVYSPLVHEK* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1913 628 Gene3D - 319 628 - -
Dod07g1913 628 CDD NAD_bind_1_malic_enz 321 619 - -
Dod07g1913 628 PRINTS Malic enzyme signature 118 142 IPR001891 GO:0004470|GO:0004471
Dod07g1913 628 PRINTS Malic enzyme signature 460 476 IPR001891 GO:0004470|GO:0004471
Dod07g1913 628 PRINTS Malic enzyme signature 317 333 IPR001891 GO:0004470|GO:0004471
Dod07g1913 628 PRINTS Malic enzyme signature 351 367 IPR001891 GO:0004470|GO:0004471
Dod07g1913 628 SMART malic_2 112 311 IPR012301 GO:0004471
Dod07g1913 628 PIRSF ME 17 627 IPR001891 GO:0004470|GO:0004471
Dod07g1913 628 Pfam Malic enzyme, NAD binding domain 321 583 IPR012302 GO:0051287
Dod07g1913 628 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 321 625 IPR036291 -
Dod07g1913 628 PANTHER MALIC ENZYME 1 624 - -
Dod07g1913 628 Pfam Malic enzyme, N-terminal domain 112 177 IPR012301 GO:0004471
Dod07g1913 628 Pfam Malic enzyme, N-terminal domain 191 310 IPR012301 GO:0004471
Dod07g1913 628 Gene3D - 36 318 IPR037062 GO:0004471
Dod07g1913 628 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 17 320 IPR046346 -
Dod07g1913 628 ProSitePatterns Malic enzymes signature. 317 333 IPR015884 GO:0004471
Dod07g1913 628 PANTHER MALIC ENZYME-RELATED 1 624 - -
Dod07g1913 628 SMART Malic_M_2 321 584 IPR012302 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1913 Dod-Chr7 49586769 49593902 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1913 K00028 - gmx:100806545 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1913 07 49586769 49593902 Dod07g1913 07 49586769 49593902 ECH
Dod01g0788 01 14447994 14453802 Dod07g1913 07 49586769 49593902 PCT