Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0788 ATGTGGAAGCTTGTGCGATTCGCGGCGTCGAGTTTGGCTCGATCGCGGCGGTTCTCGACGGCGATTCCAGGTCCGTGCATGGTTCACAAGCGCGGTGCTGATATCCTCCACGATCCTTGGTTCAACAAGGATACTGGGTTTCCTTTGACTGAAAGGGACCGATTGGGGCTTCGGGGCCTCCTTCCTCCTCGTGTCATATCATTTGAGCACCAGTATGATCGTTTCATGAATTCTTATAGGTCCTTGGAGAAGAATACCCGGGGCCAATCAGATAAAATTGTTTCCCTAGCCAAATGGAGGATCTTAAATAGACTGCATGATAGGAATGAGACTCTGTACTACAGAGTTCTTATTGATAATATTAAAGAGTTTGCTCCTATAATCTATACTCCTACGGTTGGATTAGTGTGTCAAAATTATTCAGGGTTATACAGGCGGCCACGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCTATGATCTATAACTGGCCAGCACATCAGGTAGACATGATAGTCTTGACAGATGGTAGTCGTATTCTTGGCTTAGGTGATCTTGGAGTTCAGGGCATTGGAATCCCAATAGGAAAACTTGATATTTATGTTGCTGCTGCTGGTATCAACCCACAAAGAATACTTCCAGTTATGTTAGATGTTGGCACAAATAATCAAAAGCTACTTGAAGATCCCCTTTATTTGGGTGTTCGACAACCTAGGTTGGAAGGTGAGGAGTATCTATCAGTAGTGGATGAATTTATGGAAGCTGTCCATGCTCGATGGCCTAAGGCCATTGTACAGTTTGAGGATTTCCAAATGAAGTGGGCTTTTGAAACCCTGGAACGATATTGCAAAAGGTTTTGCATGTTTAATGATGATATACAGGGCACAGCCGGTGTTGCACTTGCTGGATTATTGGGAACTGTAAGAGCCCAAGGTCGCCCATTGTCTGATTTTGTGAACCAAAAGATAGTTGTGGTTGGAGCTGGGAGTGCAGGGCTTGGTGTTCTTAAGATGGCTGTCCAGGCAGTTTCAAGGATGTCTGGGTGCAGTGAAACAGCTGCGAAAAGTCAATTTTTTTTAATTGATAAAAATGGTCTTGTCACAACAGAAAGGAGCAATCTAGATCCAGCTGCAGTTCCATTTGCTAAAAATCCAAGAGACCTAGAAGGGCTTACAGAGGGTGCTAGCATAATTGAAGTGGTTAAGAAGGTTAAGCCTCATGTGCTCCTTGGATTGTCAGGGGTTGGCGGTGTTTTCAACGAGGAGGTGCTTAAGTCAATGAGAGAATCTGTTTCAACAAAACCTGCTATCTTTGCCATGTCTAATCCAACAATGAATGCTGAGTGCACAGCAATTGATGCTTTTAATCATGCTGGAGAAAATATAGTGTTTGCTAGTGGAAGCCCTTTTGAAAATGTAAATCTTGGTAATGGAAAAGTTGGGCATGTAAATCAAGCCAACAACATGTACCTGTTCCCAGGGTAG 1494 0.4351 MWKLVRFAASSLARSRRFSTAIPGPCMVHKRGADILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEHQYDRFMNSYRSLEKNTRGQSDKIVSLAKWRILNRLHDRNETLYYRVLIDNIKEFAPIIYTPTVGLVCQNYSGLYRRPRGMYFSAKDKGEMMSMIYNWPAHQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDIYVAAAGINPQRILPVMLDVGTNNQKLLEDPLYLGVRQPRLEGEEYLSVVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYCKRFCMFNDDIQGTAGVALAGLLGTVRAQGRPLSDFVNQKIVVVGAGSAGLGVLKMAVQAVSRMSGCSETAAKSQFFLIDKNGLVTTERSNLDPAAVPFAKNPRDLEGLTEGASIIEVVKKVKPHVLLGLSGVGGVFNEEVLKSMRESVSTKPAIFAMSNPTMNAECTAIDAFNHAGENIVFASGSPFENVNLGNGKVGHVNQANNMYLFPG* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0788 497 Pfam Malic enzyme, NAD binding domain 296 497 IPR012302 GO:0051287
Dod01g0788 497 PANTHER MALIC ENZYME-RELATED 1 497 - -
Dod01g0788 497 Gene3D - 294 497 - -
Dod01g0788 497 SMART Malic_M_2 296 497 IPR012302 GO:0051287
Dod01g0788 497 Gene3D - 30 293 IPR037062 GO:0004471
Dod01g0788 497 PRINTS Malic enzyme signature 112 136 IPR001891 GO:0004470|GO:0004471
Dod01g0788 497 PRINTS Malic enzyme signature 292 308 IPR001891 GO:0004470|GO:0004471
Dod01g0788 497 PRINTS Malic enzyme signature 267 285 IPR001891 GO:0004470|GO:0004471
Dod01g0788 497 PRINTS Malic enzyme signature 326 342 IPR001891 GO:0004470|GO:0004471
Dod01g0788 497 PRINTS Malic enzyme signature 435 451 IPR001891 GO:0004470|GO:0004471
Dod01g0788 497 PRINTS Malic enzyme signature 172 201 IPR001891 GO:0004470|GO:0004471
Dod01g0788 497 PRINTS Malic enzyme signature 208 230 IPR001891 GO:0004470|GO:0004471
Dod01g0788 497 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 296 497 IPR036291 -
Dod01g0788 497 SMART malic_2 106 286 IPR012301 GO:0004471
Dod01g0788 497 PANTHER MALIC ENZYME 1 497 - -
Dod01g0788 497 ProSitePatterns Malic enzymes signature. 292 308 IPR015884 GO:0004471
Dod01g0788 497 PIRSF ME 7 497 IPR001891 GO:0004470|GO:0004471
Dod01g0788 497 Pfam Malic enzyme, N-terminal domain 106 285 IPR012301 GO:0004471
Dod01g0788 497 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 18 295 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0788 Dod-Chr1 14447994 14453802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0788 K00028 - gmx:100811081 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0788 01 14447994 14453802 Dod01g0788 01 14447994 14453802 ECH
Dod01g0788 01 14447994 14453802 Dod07g1913 07 49586769 49593902 PCT