Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1834 ATGGGATTGATCTCTGGGATTTTTATGGGGATTTTGTTTGGGATAGCATTGATGGCAGCGTGGGAGCGCATGATGAGGTACCGAAGTGCCAAGCGAATTGCAAAGGCTGCTGACATTAAAATCCTTGGATCCCTTAATAGAGATGATTTAAAAAAACTTTGCGGTGATAGTTTGCCTGAGTGGATATCTTTCCCTGTATATGAGCAGGTGAAATGGCTAAACAAGATGCTGGCTAAACTTTGGCCATATGTGGCAGAAGCAGCAACTTTGGTGATCAGAGAATCTGTTGAACCACTACTGGAAGACTACAAACCTACTGGAATTACTTCATTGAAGTTCAGCAAGCTAACACTTGGAAATGTGGCTCCAAAAATTGAAGGTATTCGAGTACAAAGTCTTACCAAAGGTCAAATCATAATGGACGTTGATTTGCGTTGGGGTGGTGATCCCAGTATTATTTTGGCTGTTGAAGCTGCACTTGTTGCATCAATCCCTATTCAGTTGAAGGATCTACAGGTTTTCGCGATTGCCCGTGTTATATTCCAACTTGCTGAAGAGATCCCTTGCATATCTGCTGTTGTTGTTGCCCTACTCGCTGAGCCAAAACCCAAAATTGATTACACTCTGAAAGCTGTTGGTGGAAGTTTGACGGCACTTCCTGGAATTTCAGATATGATTGAAGATACTGTGAACTCAATTGTTATTGATATGCTTCAATGGCCTCATAGGATTGTCGTTCCACTTGGCGGCATACCTGTCGATATTAGTGAACTGGAGCTTAAACCCCAGGGAAGGCTTACAGTGACTGTAGTCAAAGCGAATGATTTAAAGAATATGGAAATGATTGGAAAGTCAGATCCTTATGTTGTCGTGCATATTCTACCGCTATTTAAGGTTAAAACCAAGGTTATTGACAACAACTTGAATCCTGTTTGGAATCAGACATTTGAATTGATTGCAGAAGACAAAGAGACCCAGTCACTCATTCTTGAGGTTTATGATAAAGACATTGGGCAAGATAAGCGATTGGGAATAGTAAAAGTACCCCTCATTGACCTGGAAGCAGAAACTGAAAAGGAGCTTGAATTGAGGCTGCTGCCATCACTTGATACGTTGAAGGTGAAAGATAAGAAGGATCGAGGAACCTTGACAGTCAAGCTCTTGTATCATCAATTTAACAAGGAAGAGCAATTGGCTGCGCTTGAAGCAGAGAAAAAGCTGCTAGAACAAAGGAAGAAACTGAAAGCAGAGGGAGTGATAGGAAGCACAATGGATGCACTAGATGGAGCGGCATCACTAGTAGGGTCTGGTGTTGGACTGGTTGGTTCTGGCGTTGTCTCGGGTGCTGGACTTGTGGGAACCGGCGTTGGTGCTGGTGCTGGCCTTGTTGGTAGCGGTCTTGGAGCTGTTGGTAGCGGACTGAGCAAAGCTGGAAAATTCATGGGGAGGACAATCACAGGTCATGGTGCCTCCAGAAAGAGTGGTTCATCTACACCAGTCAATAATGCACAGGAGAATGGTGGTGGTGCAAAGCCTTTGTAA 1542 0.4371 MGLISGIFMGILFGIALMAAWERMMRYRSAKRIAKAADIKILGSLNRDDLKKLCGDSLPEWISFPVYEQVKWLNKMLAKLWPYVAEAATLVIRESVEPLLEDYKPTGITSLKFSKLTLGNVAPKIEGIRVQSLTKGQIIMDVDLRWGGDPSIILAVEAALVASIPIQLKDLQVFAIARVIFQLAEEIPCISAVVVALLAEPKPKIDYTLKAVGGSLTALPGISDMIEDTVNSIVIDMLQWPHRIVVPLGGIPVDISELELKPQGRLTVTVVKANDLKNMEMIGKSDPYVVVHILPLFKVKTKVIDNNLNPVWNQTFELIAEDKETQSLILEVYDKDIGQDKRLGIVKVPLIDLEAETEKELELRLLPSLDTLKVKDKKDRGTLTVKLLYHQFNKEEQLAALEAEKKLLEQRKKLKAEGVIGSTMDALDGAASLVGSGVGLVGSGVVSGAGLVGTGVGAGAGLVGSGLGAVGSGLSKAGKFMGRTITGHGASRKSGSSTPVNNAQENGGGAKPL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1834 513 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 508 IPR045050 GO:0008289
Dod07g1834 513 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Dod07g1834 513 MobiDBLite consensus disorder prediction 485 513 - -
Dod07g1834 513 SMART C2_3c 265 362 IPR000008 -
Dod07g1834 513 MobiDBLite consensus disorder prediction 489 505 - -
Dod07g1834 513 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 391 IPR035892 -
Dod07g1834 513 ProSiteProfiles C2 domain profile. 247 363 IPR000008 -
Dod07g1834 513 PRINTS C2 domain signature 328 336 IPR000008 -
Dod07g1834 513 PRINTS C2 domain signature 281 293 IPR000008 -
Dod07g1834 513 PRINTS C2 domain signature 306 319 IPR000008 -
Dod07g1834 513 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Dod07g1834 513 Gene3D C2 domain 259 417 IPR035892 -
Dod07g1834 513 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 508 - -
Dod07g1834 513 CDD C2 266 360 - -
Dod07g1834 513 Coils Coil 391 418 - -
Dod07g1834 513 Pfam C2 domain 264 360 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1834 Dod-Chr7 47658112 47664670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1834 266 356 Lipid Metabolism Gene Families AT4G00700 41.758 2.16e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1834 - - gmx:100798484 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1834 07 47658112 47664670 Dod07g1834 07 47658112 47664670 ECH
Dod01g0849 01 15431799 15439717 Dod07g1834 07 47658112 47664670 PCT