Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0849 ATGGGTTTGATTTCTGGGATTTTTCTTGGGATGGTATTCGGCATAGCGTTGATGGCAGGGTGGCAGCACATGATCAGGTACCGAAGCGCCAAGCGAATTGCAAAGGCTGTTGACATTAAACTCCTTGGATCCCTTAACAGAGACGACTTAAAGAAAATTTGTGAAATGGCTGAACAAGCAGTTATCCAAACTTTGGCCATTTGTTGCAGATGTGAGCCAGATGTTGATGTTTCCCTTGTTTCTGCAGCAGCAACTATGGTGATTAAAGAATCTGTCGAACCAATACTGGAAGAGTACAGACCCCCAGGAATTACTTCGTTGAAGTTCAGCAAGCTGTCTCTTGGAAATGTCCCTCCAAAGATTGAAGGCATTCGTGTTCACAGTCTTAAGAAAGGTCAAGTCGTAATGGACATTGATTTTCGTTGGGGTGGTGATCCAAATATTGTTCTGGGTGTTGAAGCTGCACTTGTTGCATCAATCCCTATTCAGTTGAAGGATCTCCAAGTTTTCAGCATTATCCGTGTTATATTTCAACTTTCTGAAGAGATCCCCTGCATTTCTGCTGTTGTTGTTGCTCTACTTGCTGAGCCGAAGCCTAGAATTGATTACACTCTGAAGGCTGTTGGTGGAAGTTTGACAGCACTTCCTGGAATTTCAGATATGATTGATGATACTGTGAACTCAATTGTTACTGATATGCTCCAATGGCCTCATAGGATTGTTGTTCCACTTGGTGGTGTACCTGTTGATACTAGTGAACTGGAGCTGAAACCCCAGGGACAGCTCAGAGTGACTGTGGTGAAAGCGACTGATTTAAAGAACAAGGAAATGATTGGGAAGTCTGATCCTTATGTAGTTGCGCATATTCGACCACTATTTAAGGTTAAAACCAAGGTTATTGATAACAACCTGAATCCTATTTGGAATGAGACATTTGACTTGATTGCAGAAGACACGGAGACCCAGTCAGTCCTTTTTGAGGTTTTTGATGAAGACATTGGACAAGATAAACGATTGGGAATAGTCAAGTTACCACTTATTGAACTGGAAGCAGAAACTGAGAAGGAAATGGAACTGAGGCTGCTGTCATCGCTTGATACGCTGAAGGTGAAAGATAAGAAGGATCGAGGAACATTGACAGTAAAGTTCTTCTATCATCAATTCAACAAGGAAGAGCAGCTGGTTGCATTAGAAGCAGAGAAAAAGATACTAGAAGAAAGGAAGAAGCTGAAAGCGGAGGGAGTTATAGGAAGCACAATGGATGCAGTAGATGGAGCAGCATCAGTAGTTGGGTCTGGCGTTGGAATGGTTGGCAGTGGTGTTGTTGCCGGTGCTGGACTTGTTGGGAGTGGCGTCACAGCGGGAGCCGGGCTTGTCGGGACTGGCGTCACCGCCGGAGCCGGGCTTGTCGGCAGTGGCGTCAATACCGGAGCTGGCCTTGTCGGCAGCGGTGTCACTGCCGGTGTTGGTTTCGTTGGCAGCGGTCTTGGCGCCGTTGGTAGCGGATTGAGCAAGGCAGGAAAGTTCATGGGCAGAACAATCACAGGGAGTGGACACAAAAAGAGTGGTTCAACTACTCCTGTCAATAATATAGAGGAGAGTGGTGGTGGTGCTAAGCCTCTAAAGTTCCAGTAA 1635 0.4563 MGLISGIFLGMVFGIALMAGWQHMIRYRSAKRIAKAVDIKLLGSLNRDDLKKICEMAEQAVIQTLAICCRCEPDVDVSLVSAAATMVIKESVEPILEEYRPPGITSLKFSKLSLGNVPPKIEGIRVHSLKKGQVVMDIDFRWGGDPNIVLGVEAALVASIPIQLKDLQVFSIIRVIFQLSEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGISDMIDDTVNSIVTDMLQWPHRIVVPLGGVPVDTSELELKPQGQLRVTVVKATDLKNKEMIGKSDPYVVAHIRPLFKVKTKVIDNNLNPIWNETFDLIAEDTETQSVLFEVFDEDIGQDKRLGIVKLPLIELEAETEKEMELRLLSSLDTLKVKDKKDRGTLTVKFFYHQFNKEEQLVALEAEKKILEERKKLKAEGVIGSTMDAVDGAASVVGSGVGMVGSGVVAGAGLVGSGVTAGAGLVGTGVTAGAGLVGSGVNTGAGLVGSGVTAGVGFVGSGLGAVGSGLSKAGKFMGRTITGSGHKKSGSTTPVNNIEESGGGAKPLKFQ* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0849 544 Coils Coil 387 407 - -
Dod01g0849 544 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 56 245 IPR031468 GO:0008289
Dod01g0849 544 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 474 - -
Dod01g0849 544 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 476 536 - -
Dod01g0849 544 Gene3D C2 domain 255 413 IPR035892 -
Dod01g0849 544 ProSiteProfiles C2 domain profile. 243 359 IPR000008 -
Dod01g0849 544 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 474 IPR045050 GO:0008289
Dod01g0849 544 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 476 536 IPR045050 GO:0008289
Dod01g0849 544 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 87 244 IPR039010 -
Dod01g0849 544 Pfam C2 domain 260 356 IPR000008 -
Dod01g0849 544 PRINTS C2 domain signature 277 289 IPR000008 -
Dod01g0849 544 PRINTS C2 domain signature 302 315 IPR000008 -
Dod01g0849 544 PRINTS C2 domain signature 324 332 IPR000008 -
Dod01g0849 544 SMART C2_3c 261 358 IPR000008 -
Dod01g0849 544 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 258 387 IPR035892 -
Dod01g0849 544 MobiDBLite consensus disorder prediction 514 544 - -
Dod01g0849 544 CDD C2 262 361 - -
Dod01g0849 544 MobiDBLite consensus disorder prediction 517 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0849 Dod-Chr1 15431799 15439717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0849 262 359 Lipid Metabolism Gene Families AT4G00700 37.755 2.81e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0849 - - gmx:100783641 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0849 01 15431799 15439717 Dod01g0849 01 15431799 15439717 ECH
Dod01g0849 01 15431799 15439717 Dod07g1834 07 47658112 47664670 PCT