Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1787 ATGTATAAGACGGCGTTGGAGGGGAGGAAAGGGGAGCTTGTGGATGGTGGTGAGTTGGTGGAGAGGGATGATGATTTGGAGGTTCAGATTGGTAACAAGTTGAGGAGGGATGCTTTTTTGGTGTTCAGGGCGCTGTGCAAGCTGTCGATGAAGACGCCGCCTAAAGACGCAGCTGCTGATCCACAGTTGATGAAGGGGAAGATTGTGGCCTTGGAGCTGCTGAAGATTTTGCTGGAGAATGCTGGAGCTGTCTTCAGGACTAGCGAAAGGTTTCTAGGTGCCATCAAGCAGTACTTATGTTTATCATTGTTGAAGAACAGTGCTTCAACTCTTCTCATTGTTTTCCAGCTATCATGCTCCATCTTCATCAGTTTGGTATCAAGATTTAGAGCTGGATTGAAAGCAGAAATTGGAGTTTTTTTCCCTATGATTGTTCTCAGGGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGATGATAGTGCTGCGATTTCTAGAGAAACTTTGTGATGATTCACAGATATTGGTTGACATATTTCTCAATTATGACTGTGATGTCAATTCATCCAACATATTTGAGAGGATGGTCAATGGACTTCTTAAGACTGCTCAAGGTGTCCCTCCTGGTGTAACCACCACACTTTTACCCCCTCAAGAGGCAACACTAAAACTTGAAGCCATGAAAAGCTTGGTTGCTGTTTTACAATCAATGGGGGACTGGTTGAACAGACAATTGCGCATTCCAGATACTCATTCAGCCAAGAAAGTTGAAGCAGCTGATAGCAGCAATGAATCTGGAGGTTTGACCATGGTAAATGGGAATGGAGAAGATGCAGTTGAAGGAACAGACTCTCCTCCCAAAATCTCTGTTTACGCATCTGATGTTTCAACTATTGAGCAACGCCGGGCTTATAAATTGGAACTTCAGGAAGGTATATCACTTTTTAATAGGAAGCCTAAGAAAGGAATTGAGTTCCTCATCAATGCCAATAAAGTGGGTAATTCACCTGAGGATATAGCTGCTTTTCTTAAAGATGCATCTGGGCTGAACAAGACTTTAATTGGTGATTATCTGGGAGAAAGGGAAGAATTATCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTGACTTTCAAGGGATGGCATTTGACGAGGCAATCAGGGTCTTTCTCCAAGGCTTTAGATTGCCTGGTGAGGCACAGAAAATTGATCGGATTATGGAAAAGTTCGCTGAACGTTACTGCAAATGTAATCCAAAGGCCTTTTCTAGTGCTGACACAGCATATGTCCTTGCTTATTCTGTAATATTGCTCAACACGGATGCTCACAATCCTACAGTGAAGAACAAGATGTCTGCTGATGATTTCATAAGAAACAATCGTGGCATTGATGATGGAAAAGATCTCCCAGATGAATACTTGAGGTCCTTGTATGTGAGAATATCCAGAAATGAGATCAAAATGAAAGAAAATGATATTGCTTTGCAACAAAAACAGGCTGTAAACCCTAATAGACTTTTAGGCTTGGATAGTATATTGAATATTGTGATTCGTAAACGTGGGGAAGACAGTCACATGGAAACCAGTGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACTGAGTCAGTCTATTATGCGGCAACAGATGTTGTAATCCTTAGATTCATGATTGAGGTGTGTTGGGCACCAATGTTAGCAGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAAGTTGTAATATCTCTGTGTCTTGATGGCTTCCGCTATGCTATTCATGTTACTTCTGTAATGTCCATGAAGACTCATCGTGATGCTTTTGTGACTTCATTGGCAAAGTTTACCTCTCTGCATTCTCCTGCTGATATTAAGCAGAAAAAAGTAGATGCAATTAAGGCAATAATTACTATTGCTGATGAGGATGGAAACTACTTACAAGAAGCTTGGGAGCATATCTTGACTTGTGTTTCTCGGTTTGAGCATCTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCCTTCCCTCAGAATGATTCAGAAAAGGCAAAGCAAGCAAAATCAACCATTCTTCCTGTTTTGAAGAAGAAGGGGCCTGGGAGGATGCAGTATGGAGCTGCCACATTAATGCGAGGTTCATATGACAGTGCTGGGATTGGCGGTAATGCTTCTGGAGCAGTCACATCAGAGCAGGTGAACAGTATAGTTTCTAATTTGAATATGTTGGAACAAGTTGGAAGCTCAGAAATGAATCGCATATTCACTAGGAGTCAAAAGTTGAACAGTGAGGCCATAATTGATTTCGTTAAGGCTCTATGCAAGGTCTCCATGGATGAACTGAGATCTCCATCTGATCCACGAGTTTTCAGCCTTACAAAGATTGTTGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTGTGGTCGAGCATCTGGCATGTTCTCTCTGATTTCTTTGTAACCATTGGCTGTTCCGGAAACCTTTCAATTGCGATTTTTGCAATGGATTCCTTGCGTCAATTGTCTATGAAATTTCTGGAGCGGGAAGAGTTAGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTTGTTGTTATGCGGAAGAGTAGTGCTGTTGAAATTCGGGAACTAATTATCAGATGTGTCTCTCAAATGATTTTATCACGTGTGAACAATGTCAAGTCAGGATGGAAGAGCATGTTCATGGCATTCACAACAGCAGCTTATGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTACTGAGAAGATTATTCGAGATTATTTTCCATACATCACAGAGACTGAGACCACTACATTTACAGACTGTGTGAATTGTCTTATTGCATTCACCAATAGTAGATTCAACAAAGAGGTTAGCCTAAATGCCATTGCTTTTCTTCGGTTCTGTGCAACCAAACTAGCGGAAGGAAACCTTGGCTTATCATCAAGGAACAAGGATAAGGAAAATTCTGGAAAGATTTCCTCATCTTCACCTCGAACAGGAAAAGAAGGGAAACAAGACAATGGAGAGGTGACTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCTGGATTATCTGAGCTTAGCTTTGACCCAAGGCCTGAGATAAGGAAGAGTGCCTTGGAAATCCTGTTTGAAACCTTGCGCAACCATGGCCATCTCTTTTCACTGCCTTTATGGGAAAGAGTATTTGAGTCTGTCCTCTTCCCAATATTTGATTACGTTCGACATTCTATTGATCCTTCTGGGAGTAATTCACCAGTGAATGAAGCGGAGACTGATGGTGAGCTTGATCAGGATGCTTGGCTTTATGAGACATGCACATTGGCCCTCCAATTGGTTGTAGATCTTTTTGTCAACTTTTACAGCACTGTCAATCCACTTTTAAGAAAGGTCCTAATGCTTCTTGTAAGCTTTATAAAGCGCCCTCATCAAAACCTTGCTGGCATTGGTATTGCTGCGTTTGTTCGTTTGATGAGTAATGCTGGCGAGTTATTTTCTAATGAAAAGTGGTCAGAAGTGGTTTTGTCCGTAAAAGAAGCAGCAAATGCAACCCTCCCTAACTTTTCATTCCTTGAAAGTGAAGACTTTATGACTAGAAATTATGAACGTGCTTCAATAGATGAAGATGACAGAGATCTTGCTGAGTCTGGCTCACCAAATACTTTAGCAAGCCTGAGAACTCGTCGTTTTTATGCATATTTATCTGATGCAAAAAGCCGAGCTGCTGTTCAGCTTTTGTTGATTCAGGCGGTGATGGAGATCTATAACATTTATCGTGCTTGTCTTTCAGCAAAACACATGCTAGTTCTGATTGATGCTATGCATGATGTAGCATTACATGCTCACCAGATTAACAGCAATACTATATTACGTTCAAAGCTTCAAGAGTTTGGTTCCGTGACCCAAATGCAAGACCCTCCACTGTTACGCCTTGAGAATGAATCGTACCAAATATGCCTTACATTTTTACAGAACCTTGTTATTGACAGGCCTCATAGTTATGAGGAGGCTGAGGTTGAATCTCATCTTGTTTGGCTTTGTCAGGAGGTCTTGGAGTTTTATATTGAAGTTGCTAGCTCTGGATGGATATCTGAAACTTCTCATGGTAGACAGCCACATTGGTTGATTCCATTAGGCTCTGGTAAGCGGCGAGAATTGGCTACTCGTTCACCTCTGGTTGTGGCTACTCTTCAGGCTATTTGTAGTTTGGGAGATATTTCATTTGAGAAGAACCTGTCTCAGTTTTTCCCTCTCCTTTCAAGCTTGGTGAGCTGCGAACATGGCTCAAATGAAGTCCAGGTTGCTCTCAGTGATATGCTCAGTTTATCAGTTGGTCCTGTCTTGCTGCAGTCATGTTGA 4425 0.4138 MYKTALEGRKGELVDGGELVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKDAAADPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMIVLRFLEKLCDDSQILVDIFLNYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEATLKLEAMKSLVAVLQSMGDWLNRQLRIPDTHSAKKVEAADSSNESGGLTMVNGNGEDAVEGTDSPPKISVYASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGNSPEDIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFDFQGMAFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVILLNTDAHNPTVKNKMSADDFIRNNRGIDDGKDLPDEYLRSLYVRISRNEIKMKENDIALQQKQAVNPNRLLGLDSILNIVIRKRGEDSHMETSDDLIRHMQEQFKEKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVVISLCLDGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKKVDAIKAIITIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKAKQAKSTILPVLKKKGPGRMQYGAATLMRGSYDSAGIGGNASGAVTSEQVNSIVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMDELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVVVMRKSSAVEIRELIIRCVSQMILSRVNNVKSGWKSMFMAFTTAAYDDHKNIVLLAFEITEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEVSLNAIAFLRFCATKLAEGNLGLSSRNKDKENSGKISSSSPRTGKEGKQDNGEVTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALEILFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHSIDPSGSNSPVNEAETDGELDQDAWLYETCTLALQLVVDLFVNFYSTVNPLLRKVLMLLVSFIKRPHQNLAGIGIAAFVRLMSNAGELFSNEKWSEVVLSVKEAANATLPNFSFLESEDFMTRNYERASIDEDDRDLAESGSPNTLASLRTRRFYAYLSDAKSRAAVQLLLIQAVMEIYNIYRACLSAKHMLVLIDAMHDVALHAHQINSNTILRSKLQEFGSVTQMQDPPLLRLENESYQICLTFLQNLVIDRPHSYEEAEVESHLVWLCQEVLEFYIEVASSGWISETSHGRQPHWLIPLGSGKRRELATRSPLVVATLQAICSLGDISFEKNLSQFFPLLSSLVSCEHGSNEVQVALSDMLSLSVGPVLLQSC* 1475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1787 1474 Pfam Sec7 domain 307 488 IPR000904 GO:0005085|GO:0032012
Dod07g1787 1474 MobiDBLite consensus disorder prediction 254 288 - -
Dod07g1787 1474 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 1 1467 - -
Dod07g1787 1474 Gene3D - 299 380 - -
Dod07g1787 1474 ProSiteProfiles SEC7 domain profile. 299 486 IPR000904 GO:0005085|GO:0032012
Dod07g1787 1474 MobiDBLite consensus disorder prediction 1000 1029 - -
Dod07g1787 1474 Pfam BIG2 C-terminal domain 1265 1463 IPR046455 -
Dod07g1787 1474 SUPERFAMILY ARM repeat 70 1198 IPR016024 -
Dod07g1787 1474 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 1 1467 - -
Dod07g1787 1474 Pfam C-terminal region of Mon2 protein 1038 1100 IPR032817 -
Dod07g1787 1474 Gene3D - 381 500 IPR023394 -
Dod07g1787 1474 SMART sec7_5 303 488 IPR000904 GO:0005085|GO:0032012
Dod07g1787 1474 CDD Sec7 306 488 IPR000904 GO:0005085|GO:0032012
Dod07g1787 1474 Pfam Domain of unknown function (DUF1981) 857 939 IPR015403 -
Dod07g1787 1474 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 35 193 IPR032691 -
Dod07g1787 1474 SUPERFAMILY Sec7 domain 303 493 IPR035999 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1787 Dod-Chr7 46757234 46766327 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1787 K18442 - gmx:100798955 2605.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0873 01 15986674 15998805 Dod07g1787 07 46757234 46766327 PCT