Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0873 ATGGCTTCTTCGGAAGCTGATTCCCGGCTGAGCCAGGTCGTTGTCCCCGCGCTTGAGAAGATCATCAAGAACGCGTCGTGGCGCAAGCACGCGAAGCTCGCTCACGAGTGCAAATCCGTCATCGAAACCCTAAACTCGCCGCCACAACAGCAGCAGCAGAATCCTCAGTCACCTAACTCCGACGACGTCGACGCCGCCGAGTCTGAGGCCTCGCTCCCCGGCCCGCTCCACGGTGGCGGCGCCGTCGAATACTCCCTAGCCGAGTCCGAGTCGATCCTCAGCCCTCTCATCAACGCCGCCGGCTCCGGCGTCCTGAAGATCGCCGAACCGGCCGTCGACGCCATGCAGAAGCTCATCGCCAACGGCTACCTCCGCGGCGAGGCTGACCCCGGCGGCGGCGGCCCCGAGGCGAAGCTGCTAGCGAATCTGATCGAATCGGTTTGCAAGTGCCACGATCTCGGAGACGACGCCATGGAATTGCTCGTTCTGAAAACCCTCCTATCCGCCGTAACATCGATCTCGCTTCGAATCCACGGAGATTCCTTGCTCCTGATCGTGAGAACATGCTACGATATATACCTCGGTAGCAAGAACGTGGTGAACCAAACGACCGCGAAAGCGTCGTTGATTCAGATGCTTGTGATCGTGTTTCGGAGAATGGAAGCCGATTCTTCCACGGTCCCGGTTCAGCCTATTGTGGTTGCTGAATTGATGGAGCCTGTGGAGAAGTCCGATGCGGATAACTCAATGACGCAGTTTGTGCAGGGTTTTATAACAAAAATTATGCAGGACATTGATGGAGTTTTGAACCCGGTGACCCCGAGTAGTAGGGTTTCGTCGTTGGGTGGACATGATGGGGCGTTTGAGACGACGGCGACGGTGGAGACGACGAATCCGGCAGATTTGCTGGATTCAACTGATAAGGACATGTTGGATGCTAAGTATTGGGAGATCAGTATGTATAAGACTGCGTTGGAGGGGAGGAAAGGGGAGCTGGTGGATGGGGAGGTTGTGGAGAGGGATGATGATTTGGAGATCCAGATTGGGAATAAGCTGAGGAGGGATGCATTTTTGGTGTTCAGGGCGCTTTGTAAGCTGTCCATGAAGTCGCCGCCGAAGGAAGCTTCGGCTGACCCGGTGTTGATGAAGGGGAAGATTGTGGCCCTGGAGTTGTTGAAGATCTTGCTGGAGAATGCTGGAGCTGTCTTCAGGACAAGTGACAGCAGGTTCTTGGGTGCCATCAAGCAGTACTTATGTTTATCATTGTTGAAGAACAGTGCTTCAAATCTTATGATCGTTTTTCAACTATCATGCTCTATCTTCATCAGTCTGGTATCAAGATTTAGAGCTGGATTGAAAGCAGAAATTGGTGTTTTTTTCCCTATGATTGTACTCAGAGTTCTAGAAAATGTTGCTCAACCTAATTTTCAGCAAAAGATGATAGTGCTTCGTTTTCTAGAGAAGCTTTGTGTTGATTCACAGATATTGGTGGACATTTTTATCAATTATGACTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAGCGGACTTTTTAAAACTGCCCAAGGTGCCCCTCCTGGTGTAACCACCACACTTTTGCCACCTCAAGAGGCAACACTAAGACTTGAAGCCATGAAATGCTTGGTTGCTGTATTAACATCAATGGGAGACTGGATGAACAAACAGTTGCGCATTCCAGAGCCTCTTTCGGCCAAGAAAGTTGAAGCAATTGATAATGGCCATGAAGCCGGAGGTCATCCCGTGGTGAATGGAAATGGAGAAGAGTCAGCTGAAGGATCAGAAACTCATTCTGAGATCTCCAATGATGCAACTGATGTTTCTACCATTGAGCAACGCAGGGCTTATAAACTGGAACTCCAGGAAGGTATATCACTGTTCAATAGAAAGCCTAAGAAAGGAATTGAATTCCTCATCAATGCCAATAAAGTGGGTAATTCACCAGAGGATATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTCTGATTGGTGATTATCTGGGAGAAAGAGACGAATTATCCTTGAAAGTAATGCATGCCTACGTGGATTCTTTTGAATTTCAAGGGATGGAATTTGATGAGGCAATCAGGGTCTTTCTTCAAGGCTTTAGACTTCCTGGTGAGGCGCAGAAAATTGATCGAATCATGGAGAAGTTTGCTGAACGTTATTGCAAATGTAATCCAAAAGTTTTTTCTAGTGCTGACACAGCATATGTCCTTGCATATTCTGTTATCATGCTCAATACTGATGCTCATAATCCTATGGTGAAGAACAAGATGTCTGCTGATGATTTCATAAAAAACAATCGTGGCATAGATGATGGAAAAGATGTACCAGAGGAATTCTTGAGGTCCTTGTACGACAGAATATCTAGAAATGAGATCAAGATGAAAGAAGTTGATTTGGAAACCCAACAAAGACAGGCTATGAACCCTAACAGACTTTTAGGTTTGGATAGTATATTGAACATTGTGATCCGTAAGCGGGGAGAAGACAGTAATATGGAGACCAGTGATGATTTAATCCGACGTATGCAAGAACAATTCAAAGAAAAGGCTCGCAAGACAGAGTCTGTCTATTATGCAGCAACAGATGTGGTAATTCTTAGATTCATGATTGAGGTGTGCTGGGCTCCAATGTTAGCTGCCTTTAGTGTTCCTCTTGATCAAAGTGATGATGAAGTTGTAATAGCGCTCTGTCTTGAGGGCTTCCGCTATGCTGTTCATGTTACATCTGTAATGTCCATGAAGACTCATAGAGATGCTTTTGTATCTTCATTAGCAAAGTTTACCTCCCTGCATTCTCCTGCTGATATTAAGCAGAAAAATGTAGATGCGATCAAGGCTATAGTTACTATTGCTGATGAGGATGGGAATTACTTACAAGAGGCTTGGGAGCATATTTTGACCTGTGTTTCCCGATTTGAGCATCTACATCTTCTTGGTGAGGGGGCTCCCCCAGATGCCACATTCTTTGCTTTTCCTCAGAATGATTCTGAAAAAGCAAAGCAAGCAAAATCAACTATTCTTCCTGTTCTGAAGAAGAAGGGACCTGCGAGGATGCAGTATGCAGCTGCCACGGTGATGAGGGGTTCATATGATAGTACTGGAATTGGCAGTAATGGTTCTGGGGCCGTCACATCGGAACAAGTGAACAATCTAGTTTCTAATTTGAATATGTTGGAACAAGTTGGAAGCTCAGAAATGAACCGCATATTCACTCGAAGTCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTCTGTGCAAGGTCTCTATGGAGGAACTGAGATCTCCAACTGATCCCCGGGTGTTCAGCCTTACGAAGATAGTTGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCATTTGGCATGTTCTCTCAGATTTCTTTGTAACAATTGGCTGCTCTGGAAACCTTTCAATTGCAATTTTTGCGATGGACTCTTTGCGTCAATTGTCAATGAAATTTCTAGAGCGGGAAGAGTTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAGTGCTGTTGAAATTAGAGAACTTATTATCAGATGCGTCTCTCAAATGGTTCTATCTCGTGTCAACAATGTGAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCATATGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGAGACTACTTTCCATACATCACTGAGACTGAAACGACCACCTTCACAGATTGTGTGAATTGTCTAATTGCATTCACCAATAGCAGATTTAACAAAGAGATTAGCCTGAATGCCATTGCTTTTCTGCGATTCTGTGCAACAAAACTAGCTGAAGGAGGCCTTGGTTCTTCATCAAGGAATAAGGACAAGGAAACTTTTGGAAAGATTTTGTCACCATCACCTCGATCAGGAAGAGAGGGAAAACATGAAAATGGAGATGCGACAGACAAGGAGGATCATCTCTATTTCTGGTTTCCTTTATTGGCCGGTTTGTCTGAGCTTAGCTTTGACCCAAGGCCTGAGATTAGGCAGAGAGCCTTGCAAGTCCTGTTTGAAACCTTACGCAATCATGGCCATCTCTTTTCACTACCTTTATGGGAAAGAGTGTTTGAATCAGTCCTATTCCCAATATTTGATTATGTACGTCATGCTATTGATCCTTCAGGGAGTAGCTCACAGATCAACGAAGAGGCTGACGGTGAACTTGATCAAGATGCATGGCTTTACGAGACGTGCACACTAGCCCTCCAATTGGTGGTTGACCTTTTTGTCAACTTTTATAACACTGTTAATCCACTTTTAAGAAAGGTGCTGATGCTCCTTGTAAGCTTTATAAAGCGCCCTCATCAAAGTCTTGCTGGAATTGGTATTGCTGCATTTGTTCGTTTGATGAGTAATGCTGGAGAGCTATTTTCTGAGGAGAAGTGGTTAGAAGTCGTTTTGTCACTGAAAGAAGCAGCAAATGCAACACTCCCTAACTTTTCATTCCTCGACAGTGGAGACTTTTTGAATAGAACTCATGAACATGCTTCAACAGCTGAAGATGATCGGGATCCTGCTGAGTATGGATCAGCTGATAATTTAGAAAGCCTGAGGAGTCGTCGCCTTCATGCATATTTATCTGATGCAAAATGTCGAGCTGCTGTTCAGCTTTTATTGATTCAGGCGGTGATGGAGATCTATAACATGTACCGATCTCAACTTTCAGCAAAAACCATTCTTGTCCTGTTTGATGCTTTGCATGATGTGGCATTACATGCTCACAAGATTAACAGTAATATTATTTTACGTTCAAAGCTACAAGAGTTTGGTTCTATGACCCAAATGCAAGACCCTCCACTGTTACGCCTTGAGAATGAGTCCTACCAAATATGCCTCACGTTTCTACAGAACCTTCTTGTGGACGGGCCTCATAGTTATGGGGAGGCAGAGGTTGAGACTCATCTGGTTCAGCTTTGTCAGGAGGTCTTGGAGTTTTATATTGAAGTTGCAGGTTCTGGTCAAGCGTCTGAATCTTCTCATGGTAGACAGCCACATTGGTTGATTCCTTTAGGCTCTGGGAAGCGAAGAGAATTGGGTGCACGTGCGCCTCTCGTGGTGGCTACTCTTCAGGCTGTTTGTAATCTGGAAGATACTTCTTTTGAGAAGAACCTAGCTCAATTTTTCCCCCTTCTCTCAAGCTTGATAAGCTGCGAACATGGGTCAAATGAGGTCCAGGTAGCTCTCAGTGACATGCTAAGTTTATCAGTTGGTCCTGTTTTGCTACGGTCATGTTGA 5379 0.4467 MASSEADSRLSQVVVPALEKIIKNASWRKHAKLAHECKSVIETLNSPPQQQQQNPQSPNSDDVDAAESEASLPGPLHGGGAVEYSLAESESILSPLINAAGSGVLKIAEPAVDAMQKLIANGYLRGEADPGGGGPEAKLLANLIESVCKCHDLGDDAMELLVLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMEPVEKSDADNSMTQFVQGFITKIMQDIDGVLNPVTPSSRVSSLGGHDGAFETTATVETTNPADLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDLEIQIGNKLRRDAFLVFRALCKLSMKSPPKEASADPVLMKGKIVALELLKILLENAGAVFRTSDSRFLGAIKQYLCLSLLKNSASNLMIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCVDSQILVDIFINYDCDVNSSNIFERMVSGLFKTAQGAPPGVTTTLLPPQEATLRLEAMKCLVAVLTSMGDWMNKQLRIPEPLSAKKVEAIDNGHEAGGHPVVNGNGEESAEGSETHSEISNDATDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGNSPEDIAAFLKDASGLNKTLIGDYLGERDELSLKVMHAYVDSFEFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIKNNRGIDDGKDVPEEFLRSLYDRISRNEIKMKEVDLETQQRQAMNPNRLLGLDSILNIVIRKRGEDSNMETSDDLIRRMQEQFKEKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVVIALCLEGFRYAVHVTSVMSMKTHRDAFVSSLAKFTSLHSPADIKQKNVDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKAKQAKSTILPVLKKKGPARMQYAAATVMRGSYDSTGIGSNGSGAVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPTDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAEGGLGSSSRNKDKETFGKILSPSPRSGREGKHENGDATDKEDHLYFWFPLLAGLSELSFDPRPEIRQRALQVLFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGSSSQINEEADGELDQDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSEEKWLEVVLSLKEAANATLPNFSFLDSGDFLNRTHEHASTAEDDRDPAEYGSADNLESLRSRRLHAYLSDAKCRAAVQLLLIQAVMEIYNMYRSQLSAKTILVLFDALHDVALHAHKINSNIILRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLLVDGPHSYGEAEVETHLVQLCQEVLEFYIEVAGSGQASESSHGRQPHWLIPLGSGKRRELGARAPLVVATLQAVCNLEDTSFEKNLAQFFPLLSSLISCEHGSNEVQVALSDMLSLSVGPVLLRSC* 1793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0873 1792 SUPERFAMILY Sec7 domain 622 815 IPR035999 GO:0005085|GO:0032012
Dod01g0873 1792 MobiDBLite consensus disorder prediction 42 64 - -
Dod01g0873 1792 Pfam Domain of unknown function (DUF1981) 1176 1258 IPR015403 -
Dod01g0873 1792 MobiDBLite consensus disorder prediction 39 74 - -
Dod01g0873 1792 CDD Sec7 625 807 IPR000904 GO:0005085|GO:0032012
Dod01g0873 1792 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 353 512 IPR032691 -
Dod01g0873 1792 ProSiteProfiles SEC7 domain profile. 618 805 IPR000904 GO:0005085|GO:0032012
Dod01g0873 1792 Gene3D - 700 820 IPR023394 -
Dod01g0873 1792 SUPERFAMILY ARM repeat 404 1508 IPR016024 -
Dod01g0873 1792 MobiDBLite consensus disorder prediction 1314 1348 - -
Dod01g0873 1792 Gene3D - 618 699 - -
Dod01g0873 1792 Pfam BIG2 C-terminal domain 1583 1781 IPR046455 -
Dod01g0873 1792 MobiDBLite consensus disorder prediction 584 614 - -
Dod01g0873 1792 SMART sec7_5 622 807 IPR000904 GO:0005085|GO:0032012
Dod01g0873 1792 Pfam C-terminal region of Mon2 protein 1357 1419 IPR032817 -
Dod01g0873 1792 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 9 1785 - -
Dod01g0873 1792 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 223 IPR032629 -
Dod01g0873 1792 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 1785 - -
Dod01g0873 1792 Pfam Sec7 domain 626 807 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0873 Dod-Chr1 15986674 15998805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0873 K18442 - gmx:100789988 3116.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0873 01 15986674 15998805 Dod01g0873 01 15986674 15998805 ECH
Dod01g0873 01 15986674 15998805 Dod07g1787 07 46757234 46766327 PCT