Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1670 ATGTGCACTGGTGCTGAATCTCGAGGAGATATAAATGGCGACCCTGTGATGTCAAAAGGTGGAGGAGACTACCATGAGGACAGAATGAGAACCAGAGAAGGTGGCGAACGAGCTTGCAACAGTAACACAATATTCATTCATGGCTTTCTTCAACGCCTACATAATCACCTCACTGCACTTCTCCCTAGCCTTTCTCTCTCCGAGGTGAAAGAAGAGTTGCAATCTCTTGCTAAGATTTCATGTCCAATAATAATGACTAGCATAATGTTGTATTCTAGATCAGTTGTCTCCATGTTGTTCTTGGGTCGCCAAGGGAAGGCAGAGCTAGCTGGAGGCTCACTAGCACTTGGTTTTGCCAACATCACTGCCAATTCTGTCCTTAAAGGCCTCACAATGGGAATGGACCCAATTTGCTGCCAAGCATATGGAGCCAAAAGATGGTCAGTTCTAAGCCAAACATTTTTCAGAACTGTATGTCTCCTCCTAGTTGTTGCCATACCAATTTCAATATTGTGGCTTAATATGGAACCAGTCCTTCAAATGCTAGGCCAAGACCCTGAAGTCACAAAAGTTGCCAAAGTTTACATTGTCTTCTCAATCCCAGAACTTCTAGCTCAAGCTCATCTCAACCCATTGAGGAGTTTCCTAAGGACACAAGGCTTAACCACACCAATAACAATAGTTGCTTCTTGTGCAGCATTTTTGCACCTCCCCATCAATTATTTCTTGGCTACATATTTAAACTTAGGAGTAAAGGGAATTGCACTGGCCACTGGATTGAACTCCATAAACATGATCCTTGGCTTGCTGCTCTATATTTTTTTCTCAAAGAAGCCATTGAAGCCTTGGCAAGGAGCTTCATTCCTCTCATCAGCATTTCATGGTTGGAAGCCTTTGCTAAGTTTGGCAGTGCCTAGTTGCCTTTCTGTGTGCTTGGAGTGGTGGTGGTATGAGATAATGCTCTTTCTATGTGGCTTGTTGAGCAATCCACAAGCCACAGTTGCAACTATGGGGATCCTTATTCAATCACTTGGGTTCTTGTATGTGTTCCCATATTCACTAAGTGCTGCATTGACAACAAGAATTGGTCACTCGTTAGGTGCAGGGCAACCCTCCAGGGCACAAGGCACTGCCATAATTGGTTTTATCATAGCACTTACATTTGGGGTTATAGCCTTCATTTTCCTTATGTGTGTGAGGAGAAATTTGGCTAAACTTTACACTGATGAGACACAAATTGTTGATATGGTAACAATTGTACTTCCAATTTTGGGGTTATGTGAGATTGCCAACTGGCCTCAAACAGTTTCATGTGGGATCGTAGCTGGGACTGCACGTCCTTATTTAGGTGCTAGAATTAACTTGTGTGCATTTTACCTAATTGGGTTGCCGGTGGCTATTTTTGCTTCATTCATATACAAATATGAACTTGTGGGATTGTGGTATGGAATGTTAGCAGCACAGGTTTCTTGTGTTTGTATGATGGTGTATACACTCATTAAAACAGATTGGGGGCACCAAACTGAGAGAGCAGTGGAGCTAGCTCAGGTAACTACAGAGGAAAGTGTAAATGATGAGGAAAGTGGATTACTCAATTCTGATCTATGA 1608 0.4272 MCTGAESRGDINGDPVMSKGGGDYHEDRMRTREGGERACNSNTIFIHGFLQRLHNHLTALLPSLSLSEVKEELQSLAKISCPIIMTSIMLYSRSVVSMLFLGRQGKAELAGGSLALGFANITANSVLKGLTMGMDPICCQAYGAKRWSVLSQTFFRTVCLLLVVAIPISILWLNMEPVLQMLGQDPEVTKVAKVYIVFSIPELLAQAHLNPLRSFLRTQGLTTPITIVASCAAFLHLPINYFLATYLNLGVKGIALATGLNSINMILGLLLYIFFSKKPLKPWQGASFLSSAFHGWKPLLSLAVPSCLSVCLEWWWYEIMLFLCGLLSNPQATVATMGILIQSLGFLYVFPYSLSAALTTRIGHSLGAGQPSRAQGTAIIGFIIALTFGVIAFIFLMCVRRNLAKLYTDETQIVDMVTIVLPILGLCEIANWPQTVSCGIVAGTARPYLGARINLCAFYLIGLPVAIFASFIYKYELVGLWYGMLAAQVSCVCMMVYTLIKTDWGHQTERAVELAQVTTEESVNDEESGLLNSDL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1670 535 PANTHER MULTIDRUG RESISTANCE PROTEIN 56 521 - -
Dod07g1670 535 MobiDBLite consensus disorder prediction 1 33 - -
Dod07g1670 535 CDD MATE_eukaryotic 72 510 IPR045069 GO:0042910|GO:1990961
Dod07g1670 535 Pfam MatE 305 467 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod07g1670 535 Pfam MatE 82 242 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod07g1670 535 PANTHER PROTEIN DETOXIFICATION 53 56 521 - -
Dod07g1670 535 TIGRFAM matE: MATE efflux family protein 82 481 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1670 Dod-Chr7 44515974 44520755 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1670 K03327 - gmx:106798137 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1670 07 44515974 44520755 Dod07g1670 07 44515974 44520755 ECH
Dod01g0961 01 17640003 17642090 Dod07g1670 07 44515974 44520755 PCT