Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0961 ATGGTAATCCACGCTGTTGATGGTGCAACAACGCACAATTGCATACAGGTGACTGAAGAGTTGAAATGTCTGGCAAAGATTTCATGCCCCATAATAATGACTAACATGCTCATCTACTCTCGATCTGCCATTTCCATGCTGTTCTTGGGTCGCCAAGGCAGAGTGGAGCTAGCTGGGGGTGCACTTGCAATAGGCCTTGCCAACGTCACTGCCAATGCAATTCTCAAGGGTCTAACAATGGGAATGGACCCAATTTGTTGCCAAGCATATGGTGCAAAGAGGTGGTCAGTTCTAAGCCAAACTTTTTGCAAAACTCTATGCCTCCTCATCTCAGTTTCCATACCAATTTCACTACTATGGCTCAACATGACACCAATCCTTCAATGGCTAGGCCAAGATCCAGAAGTCACAAGGGTTGCACAAGTTTACATGGTATTCTCTATCCCAGAATTGCTAGCTCAGGCTCACCTCAACCCTTTGAGGACCTTCTTAAGGACACAAGGCCTAACAGCCCCACTAACTATAGCTGCCTCTTGTGCAGCCATTTTGCACCTCCCCATCAATTATTTCTTGGCCACATATTTGAAGTTAGGGGTAAAAGGCATTGCACTAGCCACTGGTTTGAATTCCATGAACATGATTTTAGGCTTGGTGCTTTACCTTCTTTTGTCGGAGAAACCATTGAAACCTTGGGAAGGAGCTACAATTCTCTCAGCTTTCCATGGTTGGGGACCTTTGCTAAGTTTGGCATTGCCTAGTTGCATTTCAGTGTGCTTGGAGTGGTGGTGCTATGAGATCATACTCTTTCTTTGTGGTTTGTTGAGCAATCCACAAACCACAGTTGCTACCATGGGAATCCTTATTCAAACAACTGCATTATTGTATAATTTCCCATTTTCACTAAGTGCTGCCTTGACCATAAGGATTGGTCACTCATTAGGTGCAGGGCAACCTTGCCGTGCCCAAAATACTGCCATAGTAGGATTTTTTATAGCATTTGCACTTGGGGTCACTGCCTTCGTTTGCTTGACCTCAGTGAGGAAAGTGTGGGGAAAACTCTTCACTAGTGAGACACAAATTATTGACATGGTCACAGATATACTTCCAATTTTGGGGTTATGTGAGATTGGTAATTGGCCTCAGACTACTGCATGTGGGATTTTATCTGGGACTGCACGTCCTTATGTTGGTGCAAGAATAAACTTGTGTTCATTTTATCTAATTGGGTTGCCGGTTGCAATTTTGGCAGCTTTCACATATACATATCAATTGAAGGGTTTGTGGTTTGGAATGTTGGCAGCACAGATTTCCTGTTTTTGTATGATGGTGTACACACTAGTTCACACAGATTGGGAGCACCAAAGTAAGAGAGCTGAGCAACTAGCTCAGAAAGCATTAGAGGAGGAAAATGTAAATGATGGAGAAAATGGGCTTCTTAATTCAGATTTATGA 1452 0.4346 MVIHAVDGATTHNCIQVTEELKCLAKISCPIIMTNMLIYSRSAISMLFLGRQGRVELAGGALAIGLANVTANAILKGLTMGMDPICCQAYGAKRWSVLSQTFCKTLCLLISVSIPISLLWLNMTPILQWLGQDPEVTRVAQVYMVFSIPELLAQAHLNPLRTFLRTQGLTAPLTIAASCAAILHLPINYFLATYLKLGVKGIALATGLNSMNMILGLVLYLLLSEKPLKPWEGATILSAFHGWGPLLSLALPSCISVCLEWWCYEIILFLCGLLSNPQTTVATMGILIQTTALLYNFPFSLSAALTIRIGHSLGAGQPCRAQNTAIVGFFIAFALGVTAFVCLTSVRKVWGKLFTSETQIIDMVTDILPILGLCEIGNWPQTTACGILSGTARPYVGARINLCSFYLIGLPVAILAAFTYTYQLKGLWFGMLAAQISCFCMMVYTLVHTDWEHQSKRAEQLAQKALEEENVNDGENGLLNSDL* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0961 483 CDD MATE_eukaryotic 20 457 IPR045069 GO:0042910|GO:1990961
Dod01g0961 483 TIGRFAM matE: MATE efflux family protein 30 428 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod01g0961 483 Coils Coil 448 468 - -
Dod01g0961 483 PANTHER MULTIDRUG RESISTANCE PROTEIN 11 468 - -
Dod01g0961 483 PANTHER PROTEIN DETOXIFICATION 53 11 468 - -
Dod01g0961 483 Pfam MatE 30 190 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod01g0961 483 Pfam MatE 252 414 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0961 Dod-Chr1 17640003 17642090 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0961 K03327 - gmx:100816717 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0961 01 17640003 17642090 Dod07g1670 07 44515974 44520755 PCT