Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1639 ATGGTTGCAGCTGAAGTAATGTCTGAGAAACCCCTTCAAGGAGTTCCCGTCCTTGCAAGAGAACCCAGTTTTTCTTCTCCACCAAGAAGGTTGGAAGGAAAAGTTGCAATTGTAACTGGGGGTGCTAGAGGGATTGGAGAAGCAACTGTAAGAGTTTTTGTCATGAATGGTGCAAGGGTTGTGATTGCTGATGTTGAGGATGCAATTGGAAGCATGCTTGCAGAGACCTTAGCTCCTTGGGCCACCTATGTCCACTGTGATGTTAGCAATGAAGAGGACATTGTTAACTTGGTGAATTCCACAATTTCCAGGTATGGACAACTTGACATAATGTTCAACAATGCTGGGGTGCTTGGGAATCAATCCAAGAACAAGAGCATAATCAACTTTGACCCTGATGAGTTTGACAAAGTCATGAGTGTGAATGTGAAGGGCATGGCTTTGGGGATCAAGCATGCAGCAAGGGTCATGATTCCAAGAGGTGTTGGGTGCATTATATCAACATCTAGTGTTGCTGGTGTAATGGGGGGTCTTGGACCACATGCTTACACAGCTTCAAAGCATGCCATAGTTGGCCTAACAAAGAACACAGCTTGTGAGTTGGGGAGGTATGGGATAAGAGTCAATTGCATCTCCCCATTTGGGGTTGCCACATCCATGCTTGTGAATGCTTGGAGAAGTGATGAGGAGGAAAATGATGATGATGGCACCAATTTTGGGTTGCCTTCACATGAGGAAATGGAGAAAATGGAGGGGTTTGTGAGAGGGCTTGCAAACTTGCAAGGAACAACTTTAAGACCTAGAGATATTGCTGAGGCCGCCCTTTATCTTGCTAGTGATGAATCTAAGTATGTTAGTGGTCATAATCTTGTTGTGGATGGTGGAGTAACCTCCTCAAGAAATTGTGTTGGCTTGTAG 918 0.4488 MVAAEVMSEKPLQGVPVLAREPSFSSPPRRLEGKVAIVTGGARGIGEATVRVFVMNGARVVIADVEDAIGSMLAETLAPWATYVHCDVSNEEDIVNLVNSTISRYGQLDIMFNNAGVLGNQSKNKSIINFDPDEFDKVMSVNVKGMALGIKHAARVMIPRGVGCIISTSSVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWRSDEEENDDDGTNFGLPSHEEMEKMEGFVRGLANLQGTTLRPRDIAEAALYLASDESKYVSGHNLVVDGGVTSSRNCVGL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1639 305 Pfam Enoyl-(Acyl carrier protein) reductase 248 297 - -
Dod07g1639 305 Pfam Enoyl-(Acyl carrier protein) reductase 40 229 - -
Dod07g1639 305 Gene3D - 25 303 - -
Dod07g1639 305 PRINTS Glucose/ribitol dehydrogenase family signature 106 117 IPR002347 -
Dod07g1639 305 PRINTS Glucose/ribitol dehydrogenase family signature 204 221 IPR002347 -
Dod07g1639 305 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Dod07g1639 305 PRINTS Glucose/ribitol dehydrogenase family signature 35 52 IPR002347 -
Dod07g1639 305 PRINTS Glucose/ribitol dehydrogenase family signature 183 202 IPR002347 -
Dod07g1639 305 PRINTS Glucose/ribitol dehydrogenase family signature 260 280 IPR002347 -
Dod07g1639 305 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 5 305 - -
Dod07g1639 305 CDD secoisolariciresinol-DH_like_SDR_c 30 297 IPR045309 GO:0016616
Dod07g1639 305 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 32 297 IPR036291 -
Dod07g1639 305 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2A-LIKE 5 305 - -
Dod07g1639 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 171 IPR002347 -
Dod07g1639 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 183 202 IPR002347 -
Dod07g1639 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 106 117 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1639 Dod-Chr7 43740819 43742019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1639 28 298 Miscellaneous Gene Families AT4G05530 33.929 4.00e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1639 - - gmx:100790562 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1639 07 43740819 43742019 Dod07g1639 07 43740819 43742019 ECH
Dod07g1639 07 43740819 43742019 Dod01g1001 01 18776270 18777932 PCT