Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1624 ATGCAGGGATTCCATCTGGGTCACCCTCAAAATCCAACCTTGATGATGGATCCCGGTGTTGCCCCAAACACACCCTTTCAGGACACCCCTGAAGCTTCCCCTAAGCCTTACAAGAAGAGCTTCGTCACAACTCTCATGGAAGCTGCAACACTCCGAACTCCTTCTTTCAAAGAAGACAACTACTTTGTCTCCCTCTTGAAACCCTCAGAGAGGAAAGCACTTCAAGAGCTAAAGGAAAAACTCAAAAATGCTTCAACTTCATCACCATCACCATCATCTTCTTCTAATGTTGATGGTGAAAATGGTGATAATGGTGTTGTTTCTTCTGGTTCTACCATGTGGGGGATTCCACTCCTTGGTGGTGATGATAGAGCTGATGTAATACTCTTGAAGTTCCTTAGAGCAAGGGACTTCAGGGTTGGTGATGCACTCACCATGCTCCTCAAGTGCTTAACTTGGAGGAAGGAGTTTGGTGCTGAAACTATTGTTGACGAGGATTTGGGGTTCAAGGAGCTTGAAGGGGTCATAGCTTATATGCAAGGGTATGACAAAGAAGGGCACCCTGTGTGTTACAATGCATATGGGGTGTTTAGGGACAAGGACATGTATGAGAGGATCTTTGGGGATGAGGAGAAGCTGAAGAAGTTCCTTAGATGGAGGGTTCAGGTCCTTGAGAGGGGCATCAAGCTCCTACATTTCAGGCCTGGCGGGGTCAATTCCCTTATTCAGGTCACTGACCTTAAGGACATGCCCAAGAGGGAGTTGAGGGTGGCTTCTAACCAGATCCTTTCACTGTTCCAAGATAACTACCCTGAAATGGTGGCTCGAAAGATTTTCATCAATGTGCCATGGTACTTCAGCATGTTGTATTCAATGTTCAGCCCTTTTCTGACTCAAAGAACTAAGAGCAAGTTTGTGATCTCTAAGGAGGGAAATGCCGCTGAGACACTCTACAAAATGGTCCCCCAAAACCTTGCTTCTGAGTTCACTGTCAAAGGAGGGGAGAAAGTGAACATACAAATAGAAGGAATTGAGGCTGGTGCAACTATCACGTGGGACATAGTTGTGGGTGGCTGGGACTTAGAATACAGTGCTGAGTTTGTACCTAATGCTGAAGGGAGCTACACCATAGCAGTTGAAAAGCCAAGGAAGGTTGGTGCCTCAGAAGAAGCAATCCACAACTCATTCACATCAAAGGAAGCTGGCAAAATGGTACTCTCAGTTGATAACACTGCCTCAAGGAGGAAAAAAGTTGCTGCTTATCGCTATGTTGTCCGCAAATGCAGCACCATGTAA 1296 0.4599 MQGFHLGHPQNPTLMMDPGVAPNTPFQDTPEASPKPYKKSFVTTLMEAATLRTPSFKEDNYFVSLLKPSERKALQELKEKLKNASTSSPSPSSSSNVDGENGDNGVVSSGSTMWGIPLLGGDDRADVILLKFLRARDFRVGDALTMLLKCLTWRKEFGAETIVDEDLGFKELEGVIAYMQGYDKEGHPVCYNAYGVFRDKDMYERIFGDEEKLKKFLRWRVQVLERGIKLLHFRPGGVNSLIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKMVPQNLASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKVGASEEAIHNSFTSKEAGKMVLSVDNTASRRKKVAAYRYVVRKCSTM* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1624 431 MobiDBLite consensus disorder prediction 1 35 - -
Dod07g1624 431 ProSiteProfiles GOLD domain profile. 314 427 IPR009038 -
Dod07g1624 431 SUPERFAMILY CRAL/TRIO N-terminal domain 66 166 IPR036273 -
Dod07g1624 431 MobiDBLite consensus disorder prediction 80 106 - -
Dod07g1624 431 Pfam CRAL/TRIO domain 173 324 IPR001251 -
Dod07g1624 431 Pfam CRAL/TRIO, N-terminal domain 73 148 IPR011074 -
Dod07g1624 431 SMART sec14_4 171 334 IPR001251 -
Dod07g1624 431 SMART CRAL_TRIO_N_2 125 150 IPR011074 -
Dod07g1624 431 PANTHER PATELLIN-6 23 429 - -
Dod07g1624 431 PANTHER PATELLIN-1 23 429 IPR044834 GO:0008289
Dod07g1624 431 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 165 339 IPR001251 -
Dod07g1624 431 CDD SEC14 169 335 IPR001251 -
Dod07g1624 431 Gene3D GOLD domain 324 425 - -
Dod07g1624 431 Gene3D - 64 156 - -
Dod07g1624 431 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 328 425 IPR036598 -
Dod07g1624 431 SUPERFAMILY CRAL/TRIO domain 170 324 IPR036865 -
Dod07g1624 431 Gene3D - 172 323 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1624 Dod-Chr7 43612093 43614782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1624 129 304 Acyl Lipid Metabolism Gene Families AT5G47730 29.348 2.02e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1624 - - gmx:100809944 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1624 07 43612093 43614782 Dod07g1624 07 43612093 43614782 ECH
Dod01g1013 01 18968779 18978319 Dod07g1624 07 43612093 43614782 PCT