Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1013 ATGATGGAGAAAACCTTAGCCACAGGGAAATCAACAACCCCACCTTCCAGACAAACCTTGGTTTCCCATTCTTCTTTTTTCATGCAGAGATTCCATCTGGGTGTCCTTCAAAACCCTCATTCTTCATCATCATCGATGGACACCTCAACACCAACACCAGCACCAACACCACTCTCTTCTTCTTCCTCTCCTTCTCCATTAATATCCACCACCACACCCTTCCAGAACCTTCCAGAACCTTCCCCTAAGCGACACAACAACAAGAGGGGCATCGTCACAACCTTAATGGAAGCCGCAACCTTCACAACCACTTCCTTCAGGGAAGACACATACTTCGTCTCCCACCTCAAGTCCTCAGAGAAAAAAGCTCTTCAGGAGCTCAAAAACAAGCTCATGAACGCTTCCTCAGAATCCATCATTGATGATGGTGTTTCCATGTTTGGTGTCCCTTTGCTTAACGGTGGTGAAAGTGCTGATGTGTTGCTCCTCAAGTTCCTAAGAGCAAGGGACTTCAGGGTTGGTGATGCATTCAACATGCTCATAAAGTGCTTAACTTGGAGGAAGGAGTTTGGTGCTGACAATGTTGTGGATGAGGAGTTGGGGTTCAAGGAGCTTGAAGGTGTTGTGGCTTATATGCAAGGGTATGATAGGGAAGGGCACCCTGTGTGCTACAATGCTTATGGTGTGTTCAGGGATAAGGATATGTATGAGAGGGTCTTTGGGGATGAGGAGAAGCTGAAGAAGTTCTTGAGGTGGAGGGTACAGGTCCTTGAGAGGGGCATCAACCTTCTGCATTTTAAGCCTGGTGGGGTCAATTCACTTATTCAGGTCACTGACCTTAAGGACATGCCAAAGAGAGAGCTAAGGGTTGCTTCTAATCATATACTCTCTTTGTTCCAAGACAATTATCCGGAAATGGTGGCTCGTAAGATTTTCATCAATGCACCATGGTACTTCAGCTTGTTGTATTCAATGTTCTGTCCATTTCTGACCCAAAGAACTAAGAGCAAGTTTTTGATCTCTAAAGAAGGGAATGCTGCAGAGACGCTTTACAAATTTATAAGGCCTGAAGATATTCCTGTTCAGTATGGAGGACTGAGTCGGCCCAGTGATTTGCAGAATGGTCCCCCAAAACCTGCTTCTGAGTTCACAATCAAAGGAGGGGAGAAAGTGAACATACAAATTGAAGGAATTGAGAGTGGTGCAACTATAACATGGGACATTGCGGTGGGAGGGTGGGAATTGGAATACAGTGCTGAGTTTGTCCCAATTGCACAAGGCAGCTACATCATAGCAGTTGAGAAGCCAAGGAAGATTGAGGCCTCAGAAGAAGCAATCCACAACTCTTTCACCTCAAAAGAAGCTGGCAAACTGGTACTTTCTGTTGATAACAGTGCCTCCAGGAAGAAAAAAGTAGCTGCCTATCGCTATTTTGTCCGCAAATGCAGCACAACACCTGAGACGCCATTAAGCCTCAAATAA 1482 0.4555 MMEKTLATGKSTTPPSRQTLVSHSSFFMQRFHLGVLQNPHSSSSSMDTSTPTPAPTPLSSSSSPSPLISTTTPFQNLPEPSPKRHNNKRGIVTTLMEAATFTTTSFREDTYFVSHLKSSEKKALQELKNKLMNASSESIIDDGVSMFGVPLLNGGESADVLLLKFLRARDFRVGDAFNMLIKCLTWRKEFGADNVVDEELGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERVFGDEEKLKKFLRWRVQVLERGINLLHFKPGGVNSLIQVTDLKDMPKRELRVASNHILSLFQDNYPEMVARKIFINAPWYFSLLYSMFCPFLTQRTKSKFLISKEGNAAETLYKFIRPEDIPVQYGGLSRPSDLQNGPPKPASEFTIKGGEKVNIQIEGIESGATITWDIAVGGWELEYSAEFVPIAQGSYIIAVEKPRKIEASEEAIHNSFTSKEAGKLVLSVDNSASRKKKVAAYRYFVRKCSTTPETPLSLK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1013 493 Gene3D GOLD domain 378 479 - -
Dod01g1013 493 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 382 483 IPR036598 -
Dod01g1013 493 SMART CRAL_TRIO_N_2 158 183 IPR011074 -
Dod01g1013 493 MobiDBLite consensus disorder prediction 37 88 - -
Dod01g1013 493 CDD SEC14 202 366 IPR001251 -
Dod01g1013 493 Gene3D - 197 377 IPR036865 -
Dod01g1013 493 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 198 371 IPR001251 -
Dod01g1013 493 SUPERFAMILY CRAL/TRIO N-terminal domain 112 198 IPR036273 -
Dod01g1013 493 SMART sec14_4 204 368 IPR001251 -
Dod01g1013 493 MobiDBLite consensus disorder prediction 37 81 - -
Dod01g1013 493 Gene3D - 95 190 - -
Dod01g1013 493 PANTHER PATELLIN-1 71 483 IPR044834 GO:0008289
Dod01g1013 493 PANTHER PATELLIN-6 71 483 - -
Dod01g1013 493 SUPERFAMILY CRAL/TRIO domain 203 368 IPR036865 -
Dod01g1013 493 Pfam CRAL/TRIO, N-terminal domain 123 182 IPR011074 -
Dod01g1013 493 Pfam CRAL/TRIO domain 206 365 IPR001251 -
Dod01g1013 493 Coils Coil 117 137 - -
Dod01g1013 493 ProSiteProfiles GOLD domain profile. 347 481 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1013 Dod-Chr1 18968779 18978319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1013 162 360 Acyl Lipid Metabolism Gene Families AT5G47730 26.923 1.20e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1013 - - cpap:110822882 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1013 01 18968779 18978319 Dod01g1013 01 18968779 18978319 ECH
Dod01g1013 01 18968779 18978319 Dod07g1624 07 43612093 43614782 PCT