Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0898 ATGAGTTACAGAAGAGATAGTCGCTCCTCTAGATCGTCTCTTTTAGATGGGCTTGATAGTCTGGAGGAGGGTGGTCTAAGGGCTTCTTCGTCATACTCGCGCGAAATAAAAGAGCATGATAATGATAGAGCAATGGAAAATTTGCATGACAGAGTTACTTTTTTAAAGCGATTAACAGGTGATATACATGAGGAGGTTGAGTCTCATAACCAGTTGCTTGATCGAGTGGGTAACAAAATGGATGGATCAAGGGGTATGATGTTGGGAACCATGGATCGATTCAAGAAGGTTTTTGAGAAGAAATCAACGAGGAAAACATGCTCACTTGTGGCTTATTTCACAGTTGCCTTCGTATTCATATACTACCTTATAAGGATGCTTGGTTATTTCACACTTGGATAA 402 0.403 MSYRRDSRSSRSSLLDGLDSLEEGGLRASSSYSREIKEHDNDRAMENLHDRVTFLKRLTGDIHEEVESHNQLLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVAYFTVAFVFIYYLIRMLGYFTLG* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0898 133 PANTHER GOLGI SNARE BET1-RELATED 1 127 IPR039897 GO:0015031|GO:0030173
Dod07g0898 133 Gene3D - 42 106 - -
Dod07g0898 133 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 35 97 IPR000727 -
Dod07g0898 133 CDD SNARE_Bet1 38 96 IPR039899 -
Dod07g0898 133 SUPERFAMILY SNARE fusion complex 35 97 - -
Dod07g0898 133 PANTHER BET1-LIKE SNARE 1-2 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0898 Dod-Chr7 13654149 13659598 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0898 K08504 - gmx:100818014 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2510 01 64179933 64184954 Dod07g0898 07 13654149 13659598 PCT