Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2510 ATGAATCCTAGACGAGACAATCGCAACAACAGAGTTGCCCTTTTTGATGGTATTGAGGAGGGTGGCATCAGAGCATCCTCTCTCTACTCTTCTTCCCATGAAATTGATGAACATGATAATGAGCAAGCAATAGATGGATTGCAAGATAGAGTCAATCTGCTGAAAAGGTTATCAGGCGATATAAATGAGGAGGTGGATAGCCATAACCGCATGCTGGATCGTATGGGGAATGATATGGATTCATCAAGAGGAGTCCTCTCAGGCACTATGGACAAATTTAAAATGGTATGTAGATTAGTAATCTTATTTACCTTCATGAGGGAGTGTTTCTTTTCAGTTTTTCCTTTACTTGATATTTGTAGTATTCTGTTTTCTTTCATTTTTTTGTTGTTGTTGAGAAAGGGAAGCGATAAGGTGGGGGGAGTTGTATCTTCCTTCTGTCAGGATCAAATATTTATTTTTCCCATGTTGGTTTTGATGTTCGTATCATCTTTCAGGTTTTTGAGACGAAATCCAGCCGCAGAATGTTTACTCTTGTAG 540 0.3889 MNPRRDNRNNRVALFDGIEEGGIRASSLYSSSHEIDEHDNEQAIDGLQDRVNLLKRLSGDINEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVCRLVILFTFMRECFFSVFPLLDICSILFSFIFLLLLRKGSDKVGGVVSSFCQDQIFIFPMLVLMFVSSFRFLRRNPAAECLLL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2510 179 Gene3D - 42 100 - -
Dod01g2510 179 SMART tSNARE_6 29 96 IPR000727 -
Dod01g2510 179 PANTHER BET1-LIKE SNARE 1-1 1 99 - -
Dod01g2510 179 CDD SNARE_Bet1 37 94 IPR039899 -
Dod01g2510 179 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 34 96 IPR000727 -
Dod01g2510 179 PANTHER GOLGI SNARE BET1-RELATED 1 99 IPR039897 GO:0015031|GO:0030173
Dod01g2510 179 SUPERFAMILY SNARE fusion complex 31 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2510 Dod-Chr1 64179933 64184954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2510 K08504 - gmx:100814836 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2510 01 64179933 64184954 Dod01g2510 01 64179933 64184954 ECH
Dod01g2510 01 64179933 64184954 Dod07g0898 07 13654149 13659598 PCT
Dod07g0651 07 8849537 8853327 Dod01g2510 01 64179933 64184954 PCT