Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0780 ATGGTGGGCATCTTCTCGTTGGTAACAGGGAGACCTGGACCAAGTGGTTTTGGATCATCCTCAACTGCAGAACAGGTTACTGAAGGAATTGATGCCAGCAACCTCACCTGCATCGTAACAGGAGGAGCAAGTGGCATTGGGTTGGAGACAGCACGGGTCCTTGCTCTTCGAAAGGCCCATGTCATTATTGCCGTCAGGAACATGGAGTCTGCAAAGGAAGCCAAACAACTGATACTACAGGAGAACGAGTCTGCTAGAGTGGACACTATGAAGCTCGACCTTTGCTCCGTGGCATCTGTCAGATCATTTGTGGACAGCTTCATTGCTCTTAATCTTCCTCTCAACATCTTAATAAACAATGCTGGAATCATGTTCTGCCCCTTTGAGCTCTCAGAGGATGGGATTGAAATGCAGTTCCAAACAAACCATCTTGGTCATTTCCTATTGACAAACCTCCTTCTTGACAAAATGAAACAAACCGCAAAAGCCACTGGAATTGAGGGCAGGATCATAAATCTGTCATCAATTGCCCATACCTACACATACGAAGAGGGTATTCGGTTTGATGACATCAATGATAAAGTTGGTTATTCTGACAAGAAGGCTTATGGGCAATCCAAGTTGGCTAACATATTGCACGCAAATGAGCTTTCTCGTCGTTTGAAGGAAGAGGGTGTGAACATCACAGCCAACTCGGTCCACCCAGGAGTGATAATGACTCCTCTGATGAGACATTCTTCTCTACTTATGAATTTTGTGAAGATGTTCACCTTTTTCATATGGAAAAACGTCCCACAGGGAGCAGCTACAACATGCTATGTTGCTCTGCACCCAAGCTTGAAAGGTGTATCTGGGAAGTACTTTCTGGATTGCAATGAGTTTGAACCAAGTGCATTTGCCTCAAACGAACTCTTAGGAAGGAAACTCTGGGATTTCAGCAAAAAGTTGATCAACTCAATTTCCAAAGCTTGA 972 0.4455 MVGIFSLVTGRPGPSGFGSSSTAEQVTEGIDASNLTCIVTGGASGIGLETARVLALRKAHVIIAVRNMESAKEAKQLILQENESARVDTMKLDLCSVASVRSFVDSFIALNLPLNILINNAGIMFCPFELSEDGIEMQFQTNHLGHFLLTNLLLDKMKQTAKATGIEGRIINLSSIAHTYTYEEGIRFDDINDKVGYSDKKAYGQSKLANILHANELSRRLKEEGVNITANSVHPGVIMTPLMRHSSLLMNFVKMFTFFIWKNVPQGAATTCYVALHPSLKGVSGKYFLDCNEFEPSAFASNELLGRKLWDFSKKLINSISKA* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0780 323 PRINTS Glucose/ribitol dehydrogenase family signature 226 243 IPR002347 -
Dod07g0780 323 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Dod07g0780 323 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Dod07g0780 323 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Dod07g0780 323 CDD retinol-DH_like_SDR_c_like 38 310 - -
Dod07g0780 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 295 IPR036291 -
Dod07g0780 323 PANTHER RETINOL DEHYDROGENASE 5 320 - -
Dod07g0780 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Dod07g0780 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Dod07g0780 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
Dod07g0780 323 PANTHER SHORT-CHAIN DEHYDROGENASE TIC 32, CHLOROPLASTIC-LIKE 5 320 - -
Dod07g0780 323 Pfam short chain dehydrogenase 37 183 IPR002347 -
Dod07g0780 323 Gene3D - 26 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0780 Dod-Chr7 11073436 11079391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0780 35 244 Miscellaneous Gene Families AT2G29340 29.412 1.17e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0780 K11153 - gmx:100807056 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2634 01 65755176 65760333 Dod07g0780 07 11073436 11079391 PCT