Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0574 ATGAGAGATGAGAACACTAAGAAAAGCAAGCTTTCATGGCCCAAAACGTTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAACTGAAGACTTTCAAGCAGATGATATACTTTACAGAGGTGTTGATGAAGGGTGGAGGAGCAACTATTCACAGAATGAGGAATGTACTATCAAGAAAATTAAAGCAGAAAGAGCAAAGAGGAGGCACTCGGACAGAATGCGGCGAGGTAGGACCGACCATGATGCAGCTCAGCCTATAGATGTGCATAACTATAGAATCTTTGTTGCTACTTGGAATGTAGCTGGAAAATCTCCTCCTAGTTATTTGAGTCTGGAAGATTGGCTTCACACCTCTCCTCCTGCTGATATCTATGTTCTTGGGTTCCAAGAAATTGTGCCCCTCAATGCTGGTAATGTTTTGGGAACCGAAGACAATGGTCCAGCCAGAAAATGGCTAGCTCTCATTAGGAAGACCCTAAACAGTCTGCCGGGAACGATTGGCGAATGCCACACTGCTTCGCCACTCCCTGATCCTATCATAGAGTTAGATGATGATTTTGAGGGATCAGCGAGGCAGAAGGCAACATCTTTCTTCCACCGGAGGTCCTTCCAATCCTTGAGTCGCAGTATGAGAATGGATAATGACATGCCACTGCCACAAGCATCCCTTGATCGCCGTCTCAGCGTCTGCGATAGAATGATATACGGTCACAGGACGAGTGACTACGATCCGAATTATAGGTGGGCTTCCTCGGATGATGAAATTGAGCCTAGTGACTCCCCTGTTGTTACAACACAGTATTCACCGATGGCATATCGAGGTTTCTCTATAGAGGATAGAAGTAGACATAAAGGACACTCGAGATACTGTTTGGTTGCTAGTAAGCAAATGGTTGGGATATTTCTTACAGTTTGGGTGAAAAGTGATATCAGAGATGATGTTCATAACATGAAAGTGTCTTGTGTTGGCAGAGGATTGATGGGATATCTTGGAAACAAGGGTTCGATATCAATTAGCATGTCTTTGCACCAAACGAGCTTTTGCTTTGTCTGTAGTCATCTGACTTCTGGACAAAAGGAGGGCGATGAGCTAAGGAGAAATTCTGATGTGATGGAGATTCTCAGAAAGACAAGGTTTCCCCAGGTTCACGGCATGGGCGATGAGAGTTCTCCACAGACAATTCTGGAACATGATCGAATAATTTGGTTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCTGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGGTTTTGTTAGAGAATGACCAGGCATGA 1308 0.4427 MRDENTKKSKLSWPKTLVKKWFNIKSKTEDFQADDILYRGVDEGWRSNYSQNEECTIKKIKAERAKRRHSDRMRRGRTDHDAAQPIDVHNYRIFVATWNVAGKSPPSYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTIGECHTASPLPDPIIELDDDFEGSARQKATSFFHRRSFQSLSRSMRMDNDMPLPQASLDRRLSVCDRMIYGHRTSDYDPNYRWASSDDEIEPSDSPVVTTQYSPMAYRGFSIEDRSRHKGHSRYCLVASKQMVGIFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFVCSHLTSGQKEGDELRRNSDVMEILRKTRFPQVHGMGDESSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHDWKVLLENDQA* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0574 435 SUPERFAMILY DNase I-like 77 434 IPR036691 -
Dod07g0574 435 Gene3D Endonuclease/exonuclease/phosphatase 185 435 IPR036691 -
Dod07g0574 435 Pfam Endonuclease/Exonuclease/phosphatase family 96 408 IPR005135 GO:0003824
Dod07g0574 435 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 434 IPR045849 GO:0004445|GO:0046855
Dod07g0574 435 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 434 - -
Dod07g0574 435 SMART i5p_5 225 433 IPR000300 GO:0016791|GO:0046856
Dod07g0574 435 Gene3D Endonuclease/exonuclease/phosphatase 70 181 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0574 Dod-Chr7 7566510 7569213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0574 292 434 Acyl Lipid Metabolism Gene Families AT2G43900 25.749 1.86e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0574 - - gmx:100797409 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0574 07 7566510 7569213 Dod07g0574 07 7566510 7569213 ECH
Dod01g2441 01 63317321 63322503 Dod07g0574 07 7566510 7569213 PCT