Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2441 ATGAGAGATGAGAACTCGAAGAAAAGCAAGCTTTCATGGCCCAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAACCGAGGACTTTCAAGCAGATGATGATGTCCTCTGCGGAGGTGTTGATGAAGAGTGGAAGAGCAACTATTCAGAGAGGGAGGCATGCACTATCAAGAAAAGCAAAACAGAGAGATCAAGCAGAAGGTACTCAAATCAAATGCACCGAGGTAAGAATGACCTTGATGAAGCTCGGGTTACAGATGTGTACAATTATAGAATCTTTGCCGCCACATGGAACGTAGCAGGGAAGTCGCCTCCAAGTTATTTGAGTCTTGAAGATTGGCTTCATACCTCTCCACCTGCTGATATCTATGTGCTTGGGTTTCAAGAAATTGTACCTCTTAATGCGGGTAACATTTTGGGGACCGAAGACAATGGACCTGCAAGAAAATGGCTAGCTCTTATTAGGAAGACCCTGAACAGCCTTCCTGGAACAAGCGGTGGATGCCACACTCCTTCACCACTCCCTGATCCTCTTGTAGAGATTGAAGCTGATTTTGAGGGATCAATGAGGCAGAAGGCAACCTCTTTTTTCCATCGGAGGTCTTTCCAGTCCTTGAGTCGGAGTATGAGGATGGACAATGACATCTCACTGCCACAGCCAAGCCTTGATCGCCGTCTCAGCGTCTGTGATAGAATAATATTTGGTCACAGGACAAGTGACTATGACCCCAGTTATCGATGGGGTTCCTCGGATGACGAAAACGGAGCCAGTGACTCCCCGTTTACAACACAACATTCGCCAATGCAATATGGCAGTTGTTTCAATATGGAGGAGAGTGATAGACAAACAGGGCACTCAAGATATTGTTTGGTTGCTAGTAAGCAAATGGTTGGGATATTTCTAACAGTCTGGGTTAAAAGTGATATCAGAGATGATGTTCACAACATGAAAGTGTCTTGTGTTGGCAGAGGGTTGATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACCAAACTAGCTTTTGCTTTGTCTGTAGTCATTTGACTTCTGGACAAAAGGATGGTGATGAGTTAAGGAGAAATTCAGATGTAATGGAGATTCTTAGAAAGACAAGGTTTCCCCAGGTCCATGGCATGGGTGACGAGAATTCTCCAGAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCGAAAGCTCTTGTTGAGATGCGTAACTGGAAGGGTTTGTTAGAGAATGACCAGCTGCGAATAGAGCAGAGGCAAGGTCGAGTCTTTGAAGGATGGAATGAAGGAAAAATATATTTCCCTCCCACATACAAGTATTCAAATAATTCAGACAGATATGCTGGTGATGGAAGACACTCAAAACAAAAGAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGAGGCCTCCACCAATTATCTTATGTTCGTGGGGAGTCACGATTCTCTGATCATAGATCAGTTTGTAGCATATTCTTGGCAGAAGTCGAGTCTGTTAGCCGAAATCAAATCAAAAGAAGCTCCAGTTTCTCCAGTTCCAGGATCGAAGTAGAAGAGTTGTGGGGCCATTCACATGGTTATGGCTACACCGATTTGAATTTATTTTGA 1683 0.4373 MRDENSKKSKLSWPKTLVKKWFNIKSKTEDFQADDDVLCGGVDEEWKSNYSEREACTIKKSKTERSSRRYSNQMHRGKNDLDEARVTDVYNYRIFAATWNVAGKSPPSYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNILGTEDNGPARKWLALIRKTLNSLPGTSGGCHTPSPLPDPLVEIEADFEGSMRQKATSFFHRRSFQSLSRSMRMDNDISLPQPSLDRRLSVCDRIIFGHRTSDYDPSYRWGSSDDENGASDSPFTTQHSPMQYGSCFNMEESDRQTGHSRYCLVASKQMVGIFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFVCSHLTSGQKDGDELRRNSDVMEILRKTRFPQVHGMGDENSPETILEHDRIIWLGDLNYRIALSYRAAKALVEMRNWKGLLENDQLRIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDGRHSKQKRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRSVCSIFLAEVESVSRNQIKRSSSFSSSRIEVEELWGHSHGYGYTDLNLF* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2441 560 Pfam Endonuclease/Exonuclease/phosphatase family 97 510 IPR005135 GO:0003824
Dod01g2441 560 Gene3D Endonuclease/exonuclease/phosphatase 68 545 IPR036691 -
Dod01g2441 560 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 555 IPR045849 GO:0004445|GO:0046855
Dod01g2441 560 SMART i5p_5 226 525 IPR000300 GO:0016791|GO:0046856
Dod01g2441 560 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 555 - -
Dod01g2441 560 SUPERFAMILY DNase I-like 80 529 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2441 Dod-Chr1 63317321 63322503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2441 293 490 Acyl Lipid Metabolism Gene Families AT1G05630 30.631 4.58e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2441 - - gmx:100803074 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2441 01 63317321 63322503 Dod01g2441 01 63317321 63322503 ECH
Dod01g2441 01 63317321 63322503 Dod07g0574 07 7566510 7569213 PCT