Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0538 ATGGATTCAACTCATGTAATATCCATTCCCAGTAGTGAAGAGAATATTGGTCATCATAGGGAGGATCATAAAACGTTCAAATTTTCACTTCCACCCATTATTTCCCGCCTTAGAGAAAATAAAATCAAGTGCTGTCTAGTCCCCTTCATTTGTTGTCTCAGGGACAAGCAAAAGAAAAGTAAGCAAGAAACTAGTAATATGATTCACAGTGTCAAAGTTGGAATCTCCCTTGTTTTGATTTCACTTCTGTACCTCTTGGATCCCCTCTATGACCGTGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTTGTTGTCATCTTTGAATTCTCTGCAGGAGCTACTTTAGGCAAGGGTCTAAAACGTGGAATCGGGACTACATTAGGAGGTGGATTGGGTTGCATAGCAGCACTCTTGGCCCAAAAGTGTGGTGGGGTTGGCAACTCCATTGTTCTTGGTATTTCTGTATTTATCTTTGGCACAACTGCAACATATTTTCGAATGGTTCCTAGCATCAAGAAAAGACACGATTATGGGGTGATGATTTCCATCCTCACTTTCAATCTGGTGGCGCTGTCCGGTGTGCATGCTGAGCAGAAAGTGTGGGAAGTAGCCCGTGATCGTCTTTTAACGATCGTAGCGGGTTTCATCATGTGCATTTTTGTGAGCTTGTTCATCTTCCCCTTGTGGGCCAGCGATGAACTTCATCGCTCCACAGCCTCAAGATTTCAAGATCTTGCCAATACAATTCAAGGTTGTTTGGAGGAATATGTCAAATTCGCTGGTGAAAAAGAAAATCACCAAGGTGCTGACCTTACTTCTTGCAAATCGTTGCTGAACTCCAAGACGAAGGATGAGTCACTGGCATATTTCGCAAAATGGGAACCCTGGCATGGAAAATTTGGATTTTCCTACCCTTGGAACAATTACCTGAAAATTGGAGAGGTTCATCGGGTTCTGGCTGCAATTATTCTCACCCTTGGAGGTTGCTTCCAAGCCTCAAGAAAGCCCATGGCATTGTCATCTGTGAGTCAAGGAGTCCAATTTGAAGCAATTGGATTAAGCATTGTGTGGACTCTGACCGAACTTGGAGATAGCATGAGGCAAATGAGGAAATGTGAACCGCACATACCAACCAAGTTGAAGGCAGCTAAAGCAGAACTAAGCATGGTGATTTCCACGTCCAAGATAGAAACAATCGAGAATAGTGATGCACTAACAATTGCTAGCTTCATGTTCTTACTCATGGAAGTGGTGGACAAGGTAGAAGAACTGACCAAAGAGGTGGAGCAACTTGGTGAAATTGCTGGCTTTCATAACCATTCAACTGTGGTGCCTTCGTAG 1344 0.4338 MDSTHVISIPSSEENIGHHREDHKTFKFSLPPIISRLRENKIKCCLVPFICCLRDKQKKSKQETSNMIHSVKVGISLVLISLLYLLDPLYDRVGENAMWAIMTVVVIFEFSAGATLGKGLKRGIGTTLGGGLGCIAALLAQKCGGVGNSIVLGISVFIFGTTATYFRMVPSIKKRHDYGVMISILTFNLVALSGVHAEQKVWEVARDRLLTIVAGFIMCIFVSLFIFPLWASDELHRSTASRFQDLANTIQGCLEEYVKFAGEKENHQGADLTSCKSLLNSKTKDESLAYFAKWEPWHGKFGFSYPWNNYLKIGEVHRVLAAIILTLGGCFQASRKPMALSSVSQGVQFEAIGLSIVWTLTELGDSMRQMRKCEPHIPTKLKAAKAELSMVISTSKIETIENSDALTIASFMFLLMEVVDKVEELTKEVEQLGEIAGFHNHSTVVPS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0538 447 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 439 - -
Dod07g0538 447 Coils Coil 415 435 - -
Dod07g0538 447 Pfam Aluminium activated malate transporter 61 433 IPR020966 GO:0015743
Dod07g0538 447 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0538 Dod-Chr7 7142347 7145658 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0538 61 377 Miscellaneous Gene Families AT4G17970 40.125 1.67e-80 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0538 - - gmx:100527892 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2408 01 62809418 62813086 Dod07g0538 07 7142347 7145658 PCT
Dod01g2958 01 70135595 70137663 Dod07g0538 07 7142347 7145658 PCT