Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0482 ATGCCGGGGATGGTGATGGTGACGAGGGGCGGCGGATGCGGCGGAGGGAAGAGGACGAGGGCGGCGGCGGCGGAGGAGCAAGAGAGGCAGCTATCGCTGTTGGCGTTGCTGTTGGCGGCGCTGAGGAAATCTATGGTGGGTTGCAGGGTGGAGAGACCAGCTGAGGAAGTGATCTCGACCGTCCATCATCACCAGATGGAGATCGGATGGCCCACAAACGTGCAGCACATAACTCACGTCACCTTCGACCGCTTCAACGGCTTCCTCGGCCTCCCCCTTGAGTTCCAAGTCGAGATCCCTGGTCGTGTTCCCAGTGCCAGTGTAAGTGTGTTTGGAGTCTCAGCAGAATCAATGCAGTGTTCTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTTTTACTAATGCAAGACCGTTTATACTCACAGGGAGGCCTAAAGGCTGAAGGTATATTTCGTATAAATCCAGAAAACAGTCAAGAGGAGCATGTGAGGGACCAGTTGAATAGGGGCACCGTGCCGGACAACATCGATGTCCACTGCTTGGCGGGTCTAATTAAAGCCTGGTTCCGGGAGCTTCCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTCTGTGCAACACAGAAGAAGAATCTGTTGAGCTTGTCAAGCAGCTAAAGCCGACAGAGTCTGCCTTGCTCGGCTGGGCTATTGATCTCATGGCTGATGTTGTAGAAGAGGAGGAGTACAACAAAATGAATGCAAGAAATATAGCAATGGTTTTTGCTCCTAACATGACTCAGATGTCTGATCCTCTAACTGCTCTGATGCATGCGGTTCAAGTGATGAACTTACTCAAGACACTAATAATGAAGACTCTTAGAGAACGCGAAGAAACCGCGATTGGAGGATATTCACCCATGTCATTTCGTACATCAGGTCGCCAGTCCGAGGATGAATATGACAGCCAGCGAGAAATGGACACCAGTGGCGAATTGAGAGGGACTAAGTCAGATTATGATGATCATGATGCTCTCTACAGCCATAGCAGTGAAGGGGAAGAGGGGGAGGCTGAATCTTTAAGTGATATAGAGGAATGCTTCTTGAAGCAACTTGATGATAAAACAAAAGGATTCTCAGAAGAACCTTCAGGTTATTTGCATGTGAACCCTATAAGTTGTGCAGGCTATAGCATGGAATCTGTTCATTCTGTTGCATCAATTACTGACATCAAAATAGGAAATTCCTGTGATGGAGAAAATTTGGGGACAAGGATGACTGCTGTGAGCTCAAATGTTGAAACAACTAGTTCATCAATAGGATGTACAGGCACCAATGATGTGGAGATGATGGATAAATTTATAGATTCTGCACCGCCAGTGCCACTGATTGCATCCAGTTAA 1392 0.4792 MPGMVMVTRGGGCGGGKRTRAAAAEEQERQLSLLALLLAALRKSMVGCRVERPAEEVISTVHHHQMEIGWPTNVQHITHVTFDRFNGFLGLPLEFQVEIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGTVPDNIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLLCNTEEESVELVKQLKPTESALLGWAIDLMADVVEEEEYNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETAIGGYSPMSFRTSGRQSEDEYDSQREMDTSGELRGTKSDYDDHDALYSHSSEGEEGEAESLSDIEECFLKQLDDKTKGFSEEPSGYLHVNPISCAGYSMESVHSVASITDIKIGNSCDGENLGTRMTAVSSNVETTSSSIGCTGTNDVEMMDKFIDSAPPVPLIASS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0482 463 SUPERFAMILY GTPase activation domain, GAP 109 287 IPR008936 GO:0007165
Dod07g0482 463 Gene3D Rho GTPase activation protein 100 294 IPR008936 GO:0007165
Dod07g0482 463 SMART RhoGAP_3 127 290 IPR000198 GO:0007165
Dod07g0482 463 Pfam RhoGAP domain 130 264 IPR000198 GO:0007165
Dod07g0482 463 ProSiteProfiles Rho GTPase-activating proteins domain profile. 113 298 IPR000198 GO:0007165
Dod07g0482 463 ProSiteProfiles CRIB domain profile. 68 81 IPR000095 -
Dod07g0482 463 Coils Coil 24 44 - -
Dod07g0482 463 MobiDBLite consensus disorder prediction 311 352 - -
Dod07g0482 463 Gene3D CRIB domain 62 99 IPR036936 -
Dod07g0482 463 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 419 - -
Dod07g0482 463 MobiDBLite consensus disorder prediction 298 357 - -
Dod07g0482 463 PANTHER MKIAA1688 PROTEIN 1 419 IPR044785 GO:0005096
Dod07g0482 463 SMART PBD_5 68 102 IPR000095 -
Dod07g0482 463 CDD RhoGAP 130 286 - -
Dod07g0482 463 Pfam P21-Rho-binding domain 67 97 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0482 Dod-Chr7 6363486 6367475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0482 - - gmx:100807134 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3028 01 71012410 71015410 Dod07g0482 07 6363486 6367475 PCT