Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0470 ATGAAGAAGAAAGCAACAACAACAACAGCAGCAGCCACATACTCGTTCCCTGAAGAAGTCCTGGAGCACGTGTTCTCCTTCATAGTCTCCGACAAGGACAGAAGCTCGATCTCCCTGGTATGCAAATCATGGTACGAGATCGAGCGGTGGAGCAGGAAGAGGGTCTTCGTCGGGAACTGCTACGCCGTGAGCCCTGCGATCATGATCAAACGGTTCCCAGAGGTGAGATCCGTGTGGTTGAAGGGGAAACCGCACTTCGCGGACTTCAACTTGGTACCTGAAGGCTGGGGAGGGTACGCGTGGCCTTGGATCAGGGCCATGGCGGCTGCGTACCCTTGGCTTGAAGAGATCAGGCTCAAGAGGATGGTTGTTACCGACGACACCCTCGAGATCCTAGCCAAGTCCTTCAAGAACTTCAAGGTTCTTGTTCTCACTTCCTGTGAAGGCTTCACCACTGATGGACTCGCCGCCATTGCCGCTAATTGCAGGAATTTGAGGGAGTTGGACTTGCGGGAGAGTGATGTGGAAGACCATAGTGGGCATTGGCTAAGCCATTTCCCTGATTCATACACATCATTAGTTTCCCTTAACATCTCCTGCTTATCTAGCGAGGTCAATCCGTCTGCACTAGAGCGCCTGGTTTGTAGATGCCCTGACCTGAAGACCCTGCGCCTCAACCGTGCTGTGCCCCTTGATCGGCTAGCCAACCTTCTCCGTGGGGCGCCTCAGCTGGTCGAGTTGGGCACTGGCGCGTACACAGCCGAGATGCGCCCGGATGTCTTCTCGAACCTGGCAGCAGCATTCTCTGGTTGCCAGCAGCTGAAGAGCCTGTCTGGCTTCTGGGATGTGCTCCCATCTTACCTTCCAGCTGTCTATCCCATCTGCTCCAAGCTAACATCACTGAACTTGAGTTATGCTACAATCCAGAGCCCTGATCTTATGAAGCTTGTCTCTTATTGTGAGAGATTGCAGAAGTTATGGGTTCTTGATTACATAGAAGATGATGGCCTAGATGAGCTTGCTGCATCGTGCAAGGACCTGAGGGAGTTGAGGGTGTTTCCATCTGACCCATTTGGTTTAGAAGCAAATGTAGAATTGACAGAGAAGGGCCTTGTTTCTGTGTCTGAAGGCTGCCCCAAGCTCCAGTCAGTTCTATATTTTTGTCGACAAATGTCTAATGCTGCCCTAAGTACAATTGCCCAGAACCGGCCTAATTTCACTCATTTCCGGCTATGTATAATTGATCCTGTAGCTCCTGACTACCTTACCCATGGTCCTCTGGATGAAGGTTTTGGAGCCATAGTACAGCATTGCAAGGATCTTCGGCGCCTGTCCCTTTCCGGGCTTCTTACCGACCGTGTTTTCGACTATATTGGAACTTATGGGAAGAAGCTTGAGATGCTTTCTATTGCTTTTGCCGGAGACAGTGATTTGGCACTCCATCACGTGTTGTCAGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGATTGCCCCTTTGGCGACAAGGCCCTCTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTCAGTGAGCTTCGGAGCATGCAAGCTGCTGGGTCAGAAATTGCCACTACTTAATGTCGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCAGAGAGTAGTCCTGTTGAGAAGCTTTACGTGTACAGGACTGTTGCTGGGCCGAGATCGGACATGCCTAGTTTTGTATGGACGATGGAAAATGATTCTGCACTAAGGGTTTCTTGA 1779 0.5098 MKKKATTTTAAATYSFPEEVLEHVFSFIVSDKDRSSISLVCKSWYEIERWSRKRVFVGNCYAVSPAIMIKRFPEVRSVWLKGKPHFADFNLVPEGWGGYAWPWIRAMAAAYPWLEEIRLKRMVVTDDTLEILAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLRESDVEDHSGHWLSHFPDSYTSLVSLNISCLSSEVNPSALERLVCRCPDLKTLRLNRAVPLDRLANLLRGAPQLVELGTGAYTAEMRPDVFSNLAAAFSGCQQLKSLSGFWDVLPSYLPAVYPICSKLTSLNLSYATIQSPDLMKLVSYCERLQKLWVLDYIEDDGLDELAASCKDLRELRVFPSDPFGLEANVELTEKGLVSVSEGCPKLQSVLYFCRQMSNAALSTIAQNRPNFTHFRLCIIDPVAPDYLTHGPLDEGFGAIVQHCKDLRRLSLSGLLTDRVFDYIGTYGKKLEMLSIAFAGDSDLALHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKLPLLNVEVIDERGPPDSRPESSPVEKLYVYRTVAGPRSDMPSFVWTMENDSALRVS* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0470 592 Pfam Transport inhibitor response 1 protein domain 73 119 IPR041101 -
Dod07g0470 592 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 13 584 - -
Dod07g0470 592 SUPERFAMILY RNI-like 74 541 - -
Dod07g0470 592 SUPERFAMILY F-box domain 15 48 IPR036047 GO:0005515
Dod07g0470 592 SMART LRR_CC_2 295 319 IPR006553 -
Dod07g0470 592 SMART LRR_CC_2 136 161 IPR006553 -
Dod07g0470 592 SMART LRR_CC_2 487 511 IPR006553 -
Dod07g0470 592 SMART LRR_CC_2 162 199 IPR006553 -
Dod07g0470 592 SMART LRR_CC_2 438 461 IPR006553 -
Dod07g0470 592 SMART LRR_CC_2 378 402 IPR006553 -
Dod07g0470 592 SMART LRR_CC_2 111 135 IPR006553 -
Dod07g0470 592 Pfam Leucine Rich repeat 295 316 IPR001611 GO:0005515
Dod07g0470 592 Gene3D Ribonuclease Inhibitor 53 583 IPR032675 -
Dod07g0470 592 Pfam F-box 14 54 IPR041567 -
Dod07g0470 592 Gene3D - 12 52 - -
Dod07g0470 592 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 13 584 - -
Dod07g0470 592 SMART fbox_2 16 57 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0470 Dod-Chr7 6226621 6231045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0470 K14485 - gmx:100809794 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0470 07 6226621 6231045 Dod07g0470 07 6226621 6231045 ECH
Dod01g3039 01 71112376 71116371 Dod07g0470 07 6226621 6231045 PCT