Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0462 ATGGGAGTGGTCACTGTTGGTGAATTGAAGCCAAGCGTTTCAGGGAAGAGGACCTTTCGTCCTAGTTCAAGCATAAGGCATGCCACCGAATGGCCTATTTCTGATGTATCTAGTGATCTTACCATCGAAGTAGGAGCTTCAAACTTTGCACTTCACAAGTTTCCTCTAGTTTCAAAGAGTGGAAGATTTCGAAAACTGCTGATAGATGCAAAAGATTCGAATGTTTCACGCATTAGTCTCCCTGCTGTGCCGGGTGGTGTAGAGGCATTTGAGCTAGCTGCCAAATTCTGCTATAGAATCAATGTAGAGTTCACCCTCTCCAATGTTGCTATGCTGAGATGTGTAGCACATTTTCTGGAAATGACAGAAGAATATGCAGAGAAGAACTTGGAGACAAGAGTTGAAGCATATCTAAAGGAGACAGTGCTACCTAACACATCAAGCACAATATCTGTCCTTCACCATTGTGAGGCTCTTCTGCCCTTTTCTGAAGAGATTAACCTTGTCAACAGGCTAATCAATGCAATTGCAAACAATGCATGCAAAGAGCAACTTACCTCTGGATTGTTAAAACTGGACCATAACTTCCCTTCTAAGACCATTTCAAGCATGGAACCAGAAACACCCTCAGATTGGTGGGGAAAGTCTCTCAATATTCTTAGTCTTGATTTCTTCCAAAGAGTTCTGTCTGCAGTGAAGTCAAAGGGACTAAAGCAAGAAATGATCAGCAAGATTTTGATAAACTATGCACATAATTCTCTTCAAGGGATTGTTGGTAGGGACCCTCAATTAGTCAAGGGAAGTTTACCTGAGTTAGAATTGCAGAAGAAACAAAGGGTCATTGTTGAGGCCATTGTTGGCTTGCTACCAACTCAATCAAGGAAAAGTCCAGTTCCAATGGCATTTCTCTCAAGCTTGTTGAAAGCTGCAATAGCAGCATCTGCATCTGCTTCCTGCAGATCTGATTTGGAGAGGCGGATCGGCCTACAACTCGACCAGGCAATCCTTGAAGACATCCTGATTCCAACAAATTCACATCAAAACACACACAGCACAATGTATGACACAGATTCAATTTTGAGGATTTTTTCCATTTTCCTGAACTTGGATGAGGAGGATGAGGAGGACAATCGCTTGAGAGATGAAAGCGAAATGGTTTATGACTTTGACAGCCCCGGATCGCCAAAGCAAAGCTCAATTCTGAAGGTGTCAAAATTGTTGGACAATTATCTAGCTGAAGTTGCACTAGACTCAAACTTGTTGCCATCGAAGTTCATATCACTTGCAGAACTACTCCCAGATCACGCACGCATTGTTAGTGATGGACTCTATAGAGCTGCTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGACTTGGAGCGATACCGCCTTTGCAAGGCGATCGATTGCCAGAAACTGTCTCAAGAAGCCTGCAGCCATGCAGCACAAAATGAAAGGCTGCCAGTGCAGATGGCAGTCCAAGTTCTTTACTTTGAGCAAATCAGGCTTAGGAATGCTATGAATGGTGGACACAACCAGTTCTTCTTTGGTGGGCTTAATGGTCAGTTCCCTCAACGTTCAGGGAGTGGTGCAGGAAGTGGAGCAATTTCCCCTAGAGACAACTATGCATCGGTTAGAAGAGAGAACCGTGAGCTGAAGCTTGAAGTTGCCAGGATGAGAATGAGGCTCACTGATTTGGAGAAGGACCATGTCTCCATGAAGCAAGAGCTTGTAAGGTCACATCCTGCAAACAGGCTATTCAAATCATTATCCAAGAAACTATGCAAGCTCAATGCTCTATTTAGGATAAACAGCATTAAACCAAATGGTGCTAGTTCAGAGAGCAGGTTCCCATTTCCTAAGAGAAGGCGTCACTCAGTTTCATGA 1890 0.4344 MGVVTVGELKPSVSGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASNFALHKFPLVSKSGRFRKLLIDAKDSNVSRISLPAVPGGVEAFELAAKFCYRINVEFTLSNVAMLRCVAHFLEMTEEYAEKNLETRVEAYLKETVLPNTSSTISVLHHCEALLPFSEEINLVNRLINAIANNACKEQLTSGLLKLDHNFPSKTISSMEPETPSDWWGKSLNILSLDFFQRVLSAVKSKGLKQEMISKILINYAHNSLQGIVGRDPQLVKGSLPELELQKKQRVIVEAIVGLLPTQSRKSPVPMAFLSSLLKAAIAASASASCRSDLERRIGLQLDQAILEDILIPTNSHQNTHSTMYDTDSILRIFSIFLNLDEEDEEDNRLRDESEMVYDFDSPGSPKQSSILKVSKLLDNYLAEVALDSNLLPSKFISLAELLPDHARIVSDGLYRAADIFLKVHPNIKDLERYRLCKAIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQFFFGGLNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVRSHPANRLFKSLSKKLCKLNALFRINSIKPNGASSESRFPFPKRRRHSVS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0462 629 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Dod07g0462 629 Pfam NPH3 family 211 479 IPR027356 -
Dod07g0462 629 Pfam BTB/POZ domain 37 139 IPR000210 GO:0005515
Dod07g0462 629 Coils Coil 543 577 - -
Dod07g0462 629 Gene3D Potassium Channel Kv1.1; Chain A 21 139 IPR011333 -
Dod07g0462 629 SUPERFAMILY POZ domain 22 123 IPR011333 -
Dod07g0462 629 PANTHER OS12G0117600 PROTEIN 25 622 IPR043454 -
Dod07g0462 629 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 622 - -
Dod07g0462 629 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0462 Dod-Chr7 6135635 6140727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0462 1 453 EF-hand Containing Proteins AT2G47860 61.031 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0462 - - gmx:100814622 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0462 07 6135635 6140727 Dod07g0462 07 6135635 6140727 ECH
Dod01g3052 01 71217423 71221762 Dod07g0462 07 6135635 6140727 PCT