Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3052 ATGGGAGTTGTAACTGTTGCTGAATTGAAGCCTAGTATCTCAGGGAAAAGGAGCTTTCGTCCAAGTTCAAGCATAAGACATGCCACTGAATGGCCAATTTCTGATGTCTCTAGTGATCTTACTATTGAAGTAGGAGAGTCAAGCTTTGCACTTCACAAGTTTCCTCTAGTTTCTCGAAGTGGAAGAATTCGGAAACTGCTGCTAGAAGCAAAAGATTCAAAGGTTTCACGCATAAGTCTCCCAAAAGTGCCTGGTGGTACAGTGGCACTTGAGCTAGCTGCCAAATTCTGCTATGGAATCAATGTTGAGTTCACTCTCTCAAATGTTGCCATGCTACGTTGCACAGCACATTTCCTTGAAATGACTGAAGAATTCTTAGAGAAAAACTTGGAGTCGAGAGCTGAAGCATATCTAAGGGAGACAGTGCTCCCTAGTATACCAAACACAATATCTGTTCTTCACCATTGTGAAACTCTTCTTCCCATGTCAGAAGACATTAACCTTGTTAGCAGGCTTATCAATGCAATTGCAAATAATGCATGCAAAGAACAACTTACCTCTGGCTTGCTAAAACTTGACCACACTTTCCCTTCTAAAACCATCTCAAAGATGGAACCAGAAACAACCTCTGATTGGTGGGGGAAATCTTTCAATGTTCTTGGTCTTGATTTCTTCCAAAGAGTTATATCTGTGTTGAAGTCAAAGGGATTAAAACAAGACATGATCAGCAAGATTTTGATAAACTATACACATAATTCACTTCATGGGATTGGTGTCAGGGACCCCAATGTGGTCAAAGGAAGCTTACTTGACTTGGAGCTTCAGAAGAAACAAAGGGTCATTGTTGAATCCATAGTTGGCTTACTCCCTACTCAATCAAGGAAAAGCCCGGTTCCGATGGCATTTCTCTCATGTTTGTTGAAGGCTGCAATAGCAGCATCAGCATCGACCCATTGCAGGTCCGAGTTGGAGAGGCGAATTGGTCTACAACTTGACCAGGCAATCCTTGAAGACATCCTAATTCCAACAATCTCACCTCAAAATTCCCACAGCACAATGTATGACACGGATTCAATTTTGAGGATCTTTTCAATTTTCCTGAACTTGGATGATGCAGAGGATGAGGAAGATAGCCACTTCAGAGATGAAAGCCAAATGGTGTATGTCTTTGACACCCCCGGATCACCAAAACAAAGCTCCATTCTTAAGGTATCAAAACTAATGGACAATTATCTCGCTGAAGTAGCACTAGACTCAAACTTATCGCTATCAAAGTTCACAGCACTTGCTGAACTACTTCCAGATCATGCACGTATTGTAAGTGATGGTCTCTACAGAGCTGTTGATATCTTCCTTAAGGTTCATCCAAATATAAAGGACTCAGAGAGGTACCGCCTATGCAAAACCATTGATTGTCAGAAACTGTCACAAGAAGCATGCAGCCATGCAGCACAGAATGAAAGGCTGCCAGTGCAGATTGCAGTACAAGTTCTTTACTTCGAGCAAATGAGGCTCCGAAATGCGATGAATGGAGGAGGAGGAGGGGTGCACAACAACAACCACTTCTTCTTTGGTGGTGGCCACGGCCACTTCCCTCAACGTTCAGCAAGTTGTGCAGGGAGTGGTGCCATTTCCCCAAGAGACAACTATGCATCAGTGAGAAGAGAGAACCGAGAGCTGAAGCTTGAGGTTGCGAGGATGAGAATGAGGCTCACTGACTTGGAGAAAGACCATGTTTCTATGAAGCAGGAGCTTGTGAAGTCTCATCCTGCAAATAAGCTATTCAAATCATTCCAAAAAAAACTGAGCAAGCTCAATGCTCTTTTTAGGATAAGCAGTGTTAGGCCATTTGGTGGCAGAACTAGTTCGCAAAGCCGGTTCCCTTTTCCAAAGCGAAGGCGTCACTCAGTTTCATGA 1917 0.4319 MGVVTVAELKPSISGKRSFRPSSSIRHATEWPISDVSSDLTIEVGESSFALHKFPLVSRSGRIRKLLLEAKDSKVSRISLPKVPGGTVALELAAKFCYGINVEFTLSNVAMLRCTAHFLEMTEEFLEKNLESRAEAYLRETVLPSIPNTISVLHHCETLLPMSEDINLVSRLINAIANNACKEQLTSGLLKLDHTFPSKTISKMEPETTSDWWGKSFNVLGLDFFQRVISVLKSKGLKQDMISKILINYTHNSLHGIGVRDPNVVKGSLLDLELQKKQRVIVESIVGLLPTQSRKSPVPMAFLSCLLKAAIAASASTHCRSELERRIGLQLDQAILEDILIPTISPQNSHSTMYDTDSILRIFSIFLNLDDAEDEEDSHFRDESQMVYVFDTPGSPKQSSILKVSKLMDNYLAEVALDSNLSLSKFTALAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQIAVQVLYFEQMRLRNAMNGGGGGVHNNNHFFFGGGHGHFPQRSASCAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKSHPANKLFKSFQKKLSKLNALFRISSVRPFGGRTSSQSRFPFPKRRRHSVS* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3052 638 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 631 - -
Dod01g3052 638 Pfam BTB/POZ domain 37 123 IPR000210 GO:0005515
Dod01g3052 638 Coils Coil 550 584 - -
Dod01g3052 638 PANTHER OS12G0117600 PROTEIN 25 631 IPR043454 -
Dod01g3052 638 MobiDBLite consensus disorder prediction 618 638 - -
Dod01g3052 638 Pfam NPH3 family 211 480 IPR027356 -
Dod01g3052 638 Gene3D Potassium Channel Kv1.1; Chain A 26 145 IPR011333 -
Dod01g3052 638 SUPERFAMILY POZ domain 22 123 IPR011333 -
Dod01g3052 638 ProSiteProfiles NPH3 domain profile. 211 504 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3052 Dod-Chr1 71217423 71221762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3052 1 454 EF-hand Containing Proteins AT2G47860 58.144 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3052 - - gmx:100776688 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3052 01 71217423 71221762 Dod01g3052 01 71217423 71221762 ECH
Dod01g3052 01 71217423 71221762 Dod07g0462 07 6135635 6140727 PCT