Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod07g0365 | ATGAGTTATAATTCTGCACAAGAACTTGCCAGTCATGTTGTTGCTTGCAACTTTAGAACCCTGATCTTTGAAAATGAGGGCTGCAATACCAGATTTTGTGCAGATCATCAGGAGAAGCATGACTCAACCTGTCCTTTCAAGATAATTCCATGTGAGCAGAAGTGTTCAGATAGCCTCATGAGGCGTAATATGGATAGGCACTGCATAACTGTTTGTCCAGTGAAGATTGTGAATTGTCCTTTCTATGGAGTTGGCTATAGGTGTACTATTGCACAATGCTTGAATGAAAAACATTGCTCAGATGACCTTCATTCACACTTATTGCACATGCTTAAAGGCATCCACACGGAAGCATCTGCTGAAGACCTTAACCGATGA | 378 | 0.4127 | MSYNSAQELASHVVACNFRTLIFENEGCNTRFCADHQEKHDSTCPFKIIPCEQKCSDSLMRRNMDRHCITVCPVKIVNCPFYGVGYRCTIAQCLNEKHCSDDLHSHLLHMLKGIHTEASAEDLNR* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod07g0365 | 125 | PANTHER | NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE | 1 | 124 | - | - | |
| Dod07g0365 | 125 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 39 | 107 | IPR013083 | - | |
| Dod07g0365 | 125 | PANTHER | TNF RECEPTOR ASSOCIATED FACTOR | 1 | 124 | IPR043211 | - | |
| Dod07g0365 | 125 | Pfam | TRAF-type zinc finger | 40 | 93 | IPR001293 | GO:0008270 | |
| Dod07g0365 | 125 | SUPERFAMILY | TRAF domain-like | 23 | 116 | - | - | |
| Dod07g0365 | 125 | ProSiteProfiles | Zinc finger TRAF-type profile. | 40 | 89 | IPR001293 | GO:0008270 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod07g0365 | Dod-Chr7 | 4893364 | 4894503 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod07g0365 | - | - | gmx:100799182 | 192.586 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod01g3013 | 01 | 70836844 | 70841038 | Dod07g0365 | 07 | 4893364 | 4894503 | PCT |