Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3013 ATGGACCCACCCACGATCGACGTGGACCTTGGTCCTGAGAGGGTTCCAGAGGAGAGAGTTGGGGGTTCTTTGTTCTATTGTGATCTTTGTGATACAGAAGTAGTTCACAAGTTGGCTCAGATGTTCCTTCCGGGGCTAGCCACTGCATGTGTTGATAACACATCTGGGGATCTCTTCAAGACCCCTGGTTCAGTGGCTGTTGATTTGAGAAAGGAAATGATAGAATATCTTACCCAGAGAAGTGAATCATTTGTTGCTGAATCTGTTATCTTGGAAGGTGGGCCAGATGGTGAAGAATCAGATCATCCTTTTGATATCATTTCTAACTTTGTTGATGACTTTGCTAGTTCCAAGAGGAATTTATTTACTCGGGTTTCAGGATGGCTGCTAAGCGAAAAGAGAGAAGATAGAATTGATGATTTTGTCCAGGAGATGGTAATGAATAATTTTTGGACACTAGATAGGAGACAAACAATTGCAGAAACATTACTAAAGAATGTTGATTTTGAGAACAAATTTCATTGCGGCATGAAGTTTAACTCTACAGATGAGCTTTCCAATCATGTTCCTCATTGCAACTTTAGACCTATGATCTGCGAAAATGAGGGATGCAATGCCAGATTTACAGCAGGTCAATTGAAGAAACATGACTCAACTTGCTCCTTCAAAATAATCCCATGTGAACAGAAGTGTTCAGATAGCATTATGAGACGTCACATGGACAGGCATTGTATCACTGTTTGTCCAATGAAGCTTGTAAATTGTCCCTATTATGCAGTAGGTTGTCGGTCTGCTATTGCACAATGTTTGATTGAAAAACACTGTTCAGATGATATTTGTTCTCACTTGTGGTACTTGCTCAAAGGCAAATACAAGGAAGCATCTGGGGAAGATCTTCAAAGACGGGTAGAGCAAATTGTACAGGTATCATCAGTCAGCCGGTTAGCAGAGGCTCGAGATGTGAGATCTCTAAACTTCATTGTCAAGGATATCGAAGCTGAGTTAGGGCCTTTAGAGTTGAATGCTGTGAAGAAAGATATGACAGAGACTGTTGCCAAAAATGATGATGGGGAAGGGAGCGACAACAATACAAAGGGCAGTGAACCGAGTGCAGAGACTGTTGCCAAAAATGATGATGGGGAAGATAGTAACAATACAAAGGGCAGTGAACCAAGCACAAAGGCTTCAGATACGGTGAATTCATCAGATAAAGCTGAAGTGAGTGATATTGTCGATATGGATAGTTCAGAGAATACTGCCAAGGTCAAAGATAGCAAATATAGTCACATTGAAAGCAGGGGCAGTGGACAGAGGACACAGATTCCAAATATGGATAGTTTATCTAATGAAGCTGAAATTAGCATTGTGAACAAGGACAGTGCACACATTTTCAGCGAGAACAAAGATGGTGCAGCCAGTGGCTTTGAAATCAACGGCAACCAAGATAGCACTCAGATAAATGTGAAAATCTTATCGGATAAAGGGGAGATCAGTGCCACAAGTGAGGACAGTGCAGAGAATAGCATTAGAAACAAACATGTTGAAGACAGCAAAATTGAAGATAAGGATACTAATGAACAAAGCATTCAGAACTCAGAAAATGGAAACCAAGGGTCGTGCAGAGTGTAA 1629 0.4113 MDPPTIDVDLGPERVPEERVGGSLFYCDLCDTEVVHKLAQMFLPGLATACVDNTSGDLFKTPGSVAVDLRKEMIEYLTQRSESFVAESVILEGGPDGEESDHPFDIISNFVDDFASSKRNLFTRVSGWLLSEKREDRIDDFVQEMVMNNFWTLDRRQTIAETLLKNVDFENKFHCGMKFNSTDELSNHVPHCNFRPMICENEGCNARFTAGQLKKHDSTCSFKIIPCEQKCSDSIMRRHMDRHCITVCPMKLVNCPYYAVGCRSAIAQCLIEKHCSDDICSHLWYLLKGKYKEASGEDLQRRVEQIVQVSSVSRLAEARDVRSLNFIVKDIEAELGPLELNAVKKDMTETVAKNDDGEGSDNNTKGSEPSAETVAKNDDGEDSNNTKGSEPSTKASDTVNSSDKAEVSDIVDMDSSENTAKVKDSKYSHIESRGSGQRTQIPNMDSLSNEAEISIVNKDSAHIFSENKDGAASGFEINGNQDSTQINVKILSDKGEISATSEDSAENSIRNKHVEDSKIEDKDTNEQSIQNSENGNQGSCRV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3013 542 MobiDBLite consensus disorder prediction 407 431 - -
Dod01g3013 542 MobiDBLite consensus disorder prediction 506 527 - -
Dod01g3013 542 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 1 523 IPR043211 -
Dod01g3013 542 MobiDBLite consensus disorder prediction 496 542 - -
Dod01g3013 542 Pfam TRAF-type zinc finger 216 274 IPR001293 GO:0008270
Dod01g3013 542 MobiDBLite consensus disorder prediction 528 542 - -
Dod01g3013 542 MobiDBLite consensus disorder prediction 352 443 - -
Dod01g3013 542 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 249 IPR013083 -
Dod01g3013 542 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 1 523 - -
Dod01g3013 542 MobiDBLite consensus disorder prediction 386 405 - -
Dod01g3013 542 SUPERFAMILY TRAF domain-like 175 230 - -
Dod01g3013 542 ProSiteProfiles Zinc finger TRAF-type profile. 216 263 IPR001293 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3013 Dod-Chr1 70836844 70841038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3013 - - gmx:100799182 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3013 01 70836844 70841038 Dod07g0365 07 4893364 4894503 PCT