Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0168 ATGCGGTGTTGTGTTACGACGTTGTCGGTCGTGGTTGTTTTGGTGGTGGTGCCGGTGGTGGTGATGTGCGGCGTAGTGCTGCCACTGGAACGTGTGGTTCCATTAGGGCGGCGCGTGGAGATGGAGTACATGAAGGCGCGTGACAGGGCGCGTCACGCGAGAATGCTGCGGGGTGGTGGTGGTGTTGGTGTCGGGGGAGTGGTGAACTTCCCCGTGCAAGGAACCTCCGATCTTAGCTCCGCTGGGTACGGGTTGTATTTTACCAAGGTGAAGATGGGGTCTCCTCCAAGAGAATTTAACGTGCAGATTGATACTGGAAGTGACATCTTGTGGGTTAACTGCAATACTTGCAGCAATTGCCCTCAATCTAGTGGACTTGGGATTGAGCTCAATTTCTTTGACACGGTTGGCTCATCCACGGCTGTACTGGTTCCGTGCTCAGACCCAATATGTGCTTCCGACGTTCAAGGAGCAGCAGCTGAGTGCTCTGCTCAGGTTAATCAGTGCAGCTACACTTTTCAGTATGGGGATGGAAGTGGAGCAACTGGCTATTATGTTTCTGATGCAATGTATTTCGACATGATCCTGGGACAGTCGTCGATTGCTAACTCTTCAGCTACCATTGTTTTTGGGTGTAGCAGCTATCTGTCTGGAGATTTGACTAAGTCAGATAAAGCGGTCGATGGAATTTTTGGGTTTGGCCCTGGTCCTCTATCGGTTGTATCACAATTGTCTTCACGTGGCATAACACCCACCAAAGTGTTCTCTCATTGTTTAAAAGGAGATGGCAATGGAGGAGGCATACTAGTTCTTGGTGAGATTTTGCACCCGAGTATTGTTTATAGTCCACTGGTCCCATCACAGCCTCATTACAACTTAAATCTTCAGAGCATCTCTGTCGATGGACAACTCCTCTCAATTAACCCAGCTGTATTTGCAACATCTACCAACCGAGGAACTATAGTTGACTCTGGTACAACACTGGCTTATCTTGTTCAAGAAGCTTATGATCCTCTTGTCAACGCTATAACTACAGCTGTGTCACAGTCTGCCAATCCCTTGATTTCAAAAGGAAACCAGTGTTATCTGATCTCAACCAGTGTTGGTGATATATTTCCTTCAGTCAGTTTAAACTTTGCCGGTGGAGCATCAATGGTTTTAAAACCAGAACAGTACCTTACACACAATGGTTTCATTGATACAGATGCATTGTGGTGCATCGGTTTCCAAAAAGTGCAGGAGGGAGTCTCAATTTTAGGAGATCTTGTCTTAAAAGATAAGATAATTGTGTATGACTTAGCCCATCAACGAATTGGATGGGCTAGCCGTGATTGTTCCCTGCCTGTAAATGTCTCCGTGACCACGAGCAAGGATGAGTACATTGATGCAGGACAGACAAGTGTCAGCAGTGCAAATATAGGCGCACTCTCCAAGTTGCTACCTGTAAGCATTGTGGCTCTCTCTATGCAGATAGCAATTTTCACCAAGTCCCCATTTTTGTAA 1503 0.4684 MRCCVTTLSVVVVLVVVPVVVMCGVVLPLERVVPLGRRVEMEYMKARDRARHARMLRGGGGVGVGGVVNFPVQGTSDLSSAGYGLYFTKVKMGSPPREFNVQIDTGSDILWVNCNTCSNCPQSSGLGIELNFFDTVGSSTAVLVPCSDPICASDVQGAAAECSAQVNQCSYTFQYGDGSGATGYYVSDAMYFDMILGQSSIANSSATIVFGCSSYLSGDLTKSDKAVDGIFGFGPGPLSVVSQLSSRGITPTKVFSHCLKGDGNGGGILVLGEILHPSIVYSPLVPSQPHYNLNLQSISVDGQLLSINPAVFATSTNRGTIVDSGTTLAYLVQEAYDPLVNAITTAVSQSANPLISKGNQCYLISTSVGDIFPSVSLNFAGGASMVLKPEQYLTHNGFIDTDALWCIGFQKVQEGVSILGDLVLKDKIIVYDLAHQRIGWASRDCSLPVNVSVTTSKDEYIDAGQTSVSSANIGALSKLLPVSIVALSMQIAIFTKSPFL* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0168 500 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 7 463 - -
Dod07g0168 500 ProSiteProfiles Peptidase family A1 domain profile. 86 441 IPR033121 -
Dod07g0168 500 SUPERFAMILY Acid proteases 82 447 IPR021109 -
Dod07g0168 500 Gene3D Acid Proteases 68 273 IPR021109 -
Dod07g0168 500 Gene3D Acid Proteases 274 450 IPR021109 -
Dod07g0168 500 Pfam Xylanase inhibitor N-terminal 86 272 IPR032861 -
Dod07g0168 500 PANTHER ASPARTYL PROTEASES 7 463 IPR001461 GO:0004190|GO:0006508
Dod07g0168 500 Pfam Xylanase inhibitor C-terminal 290 441 IPR032799 -
Dod07g0168 500 PRINTS Pepsin (A1) aspartic protease family signature 320 331 IPR001461 GO:0004190|GO:0006508
Dod07g0168 500 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Dod07g0168 500 PRINTS Pepsin (A1) aspartic protease family signature 417 432 IPR001461 GO:0004190|GO:0006508
Dod07g0168 500 CDD pepsin_A_like_plant 86 445 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0168 Dod-Chr7 2237918 2243519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0168 84 446 Miscellaneous Gene Families AT1G44130 26.963 2.47e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0168 - - gmx:100820394 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0168 07 2237918 2243519 Dod07g0168 07 2237918 2243519 ECH
Dod01g2800 01 68124492 68129661 Dod07g0168 07 2237918 2243519 PCT