Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0165 ATGTCATCAATGTTTAATAGATTTTGGGGATCGCAAGAACAGCAATTTCAGCCTCATTTGCAGGATGGTTCTTCAGAGACACAATCACGGTATCCACCATCGGTGTTGAGCTCCCCAAGTTCTATTTCTAGGCCTGCTACGCCCACTGCCTCTTCCTCCAGCAACCGCAATCCACAGAGACCTGAAGAAAGGTTGCACTCTCCTTCACAAGTCCCCCCTACCGAAGCTGCTGGCGTTATTGCTGCTTTGAAGGACAAGAGTGTTGATGAGTTACGGAAAATTTTATCTGACAAAGATGTGTATCAGAAGTTTTTACAGTCACTTGATCAGGTCAAGATTCAAAATAATCTGAAAGATGATCTTTGCAAGGAGAATATGCTGCTTGTTGAGGAAAATCTACGAAAGGAACCTCGCATTGTGGAACTCAGGAATCAGTGTAGAATAATTCGGACCACTGAGTTAGCTGCTGCTCAGGAGAAACTAAATGACCTTGAGAAGCAGAAGGAAGAAATGTTAAAGTTGAATGCCCCAGGATCCCTTCTTCACAGAATTCAAGAGGCTATGAATGAGATAGAAGAGGAATCTGAAAATCTGCACCAGCAATTCCTTGACAGAGAGATTGACCTTGGAGCATTTTTGCAGAAATACAAGAAGCTACACGTAGCTTACCACAGCAAAACTCTGATACAGCTTGCAGCTAGAACATCAAATATTTGA 717 0.4282 MSSMFNRFWGSQEQQFQPHLQDGSSETQSRYPPSVLSSPSSISRPATPTASSSSNRNPQRPEERLHSPSQVPPTEAAGVIAALKDKSVDELRKILSDKDVYQKFLQSLDQVKIQNNLKDDLCKENMLLVEENLRKEPRIVELRNQCRIIRTTELAAAQEKLNDLEKQKEEMLKLNAPGSLLHRIQEAMNEIEEESENLHQQFLDREIDLGAFLQKYKKLHVAYHSKTLIQLAARTSNI* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0165 238 Gene3D Helix hairpin bin 163 230 IPR029012 -
Dod07g0165 238 MobiDBLite consensus disorder prediction 1 73 - -
Dod07g0165 238 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 6 237 - -
Dod07g0165 238 Coils Coil 181 204 - -
Dod07g0165 238 Coils Coil 154 174 - -
Dod07g0165 238 Pfam Modifier of rudimentary (Mod(r)) protein 84 227 IPR009851 -
Dod07g0165 238 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 6 237 - -
Dod07g0165 238 MobiDBLite consensus disorder prediction 1 58 - -
Dod07g0165 238 ProSiteProfiles VPS37 C-terminal domain profile. 158 238 IPR009851 -
Dod07g0165 238 SUPERFAMILY Endosomal sorting complex assembly domain 179 226 IPR037202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0165 Dod-Chr7 2196842 2200087 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0165 K12185 - gmx:100305851 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0165 07 2196842 2200087 Dod07g0165 07 2196842 2200087 ECH
Dod01g2796 01 68103631 68106801 Dod07g0165 07 2196842 2200087 PCT