Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2796 ATGTTCAGATTCTGGGGATCACAAGAGCAACAACCTCAGCATGATAGTTCTTCAACGCAGTCGTGGTATCCGCCATCGGTAGTGAGCTCAACGAGTCCTTCCAGGCCTGCCACGCCTTCCGCCTCTTCCTCCGGCGGTTACTCTTCGCCGAGGTGGCACCCTCCGTCGCATGTTCCGCCTGCTGAAGCCGCTGGAGTTATTGCCGCTTTGAAGGAGAAGAGTGCTGAGGAGTTGCGGAAGCTTTTGTCTGACAAGGATGCGTATCAGCAGTTTTTTAATTCGCTTGATCTGGTCAAGACTCAAAATAATCTGAAAGATGAACTTTGCAAGGAGAATTTTCAGCTAGCGGAGGAAAATCTGCAAAAGGAACCTCGTATCAGTGAACTTAGGAATCAATGTAGCATTATTCGGACAACTGAGTTAGCTGCTGCTAAAGAGAAATTAAATGAGCTTGAGAAGCAGAAAGAAGAAATATTGAAGATGAATTCCCCAGCATCCCTTCTTCAAAGGACTCATGAATCTATGAATAAGACAGAAGAGGAATCTGAAAATCTGCACCAGCAACTCCTTGACAGAGAGATTGACCTTGCAGCATTTTTGCAGAAATACAAGAAGCTACGTGCTGCTTACCACCGGAAAAGTCTCGTACATCTTGCTGCTAGAACATCAAGTATATGA 678 0.4572 MFRFWGSQEQQPQHDSSSTQSWYPPSVVSSTSPSRPATPSASSSGGYSSPRWHPPSHVPPAEAAGVIAALKEKSAEELRKLLSDKDAYQQFFNSLDLVKTQNNLKDELCKENFQLAEENLQKEPRISELRNQCSIIRTTELAAAKEKLNELEKQKEEILKMNSPASLLQRTHESMNKTEEESENLHQQLLDREIDLAAFLQKYKKLRAAYHRKSLVHLAARTSSI* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2796 225 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 3 224 - -
Dod01g2796 225 Coils Coil 168 188 - -
Dod01g2796 225 SUPERFAMILY Endosomal sorting complex assembly domain 164 213 IPR037202 -
Dod01g2796 225 Gene3D Helix hairpin bin 150 218 IPR029012 -
Dod01g2796 225 Pfam Modifier of rudimentary (Mod(r)) protein 72 214 IPR009851 -
Dod01g2796 225 ProSiteProfiles VPS37 C-terminal domain profile. 145 225 IPR009851 -
Dod01g2796 225 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 3 224 - -
Dod01g2796 225 MobiDBLite consensus disorder prediction 1 60 - -
Dod01g2796 225 MobiDBLite consensus disorder prediction 1 50 - -
Dod01g2796 225 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2796 Dod-Chr1 68103631 68106801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2796 K12185 - gmx:100305851 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2796 01 68103631 68106801 Dod07g0165 07 2196842 2200087 PCT