Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0122 ATGCTGAAGAAAATCATGAAAGGAGGGCACAAGAAGCCCTCCAAGTCCTCCGACTCCGCCGATCCGATGACCGCCGTAGCCGCCGCCGTCAACAACGTTGTCGTCAACCACGCCTCCCGTGGCGGCGGCGGCACAGCGGCGCTCCCTGCTCCTCCGTCTTCCAATTCCGCCGGAGCTCCGATCCAGCCTCCGTCCGGGGCCATGGAAATCCTCCCGCCGTTCCGCGAGGTCGCTGCCTCCGATCGCCAGAGCCTCTTCCTCCGCAAACTGAAAATCTGCTGCTACGTTCTCGACTTCTCCGACACGCTGAAGAGCGTTCGCGAGAAGGAGATCAAGCGCCAAACGCTGATGGAACTCGTCGAGTTCATCCAATCAGGCTCCGGGAAATTGTCGGAGAATTGCCAGGAAGAGATGATACGTATGATATCGGCGAACATCTTCCGGTGCCTCCCGCCAGCGTCGCACGAGAACACCGGCCAAGAAACCACCGATCCGGAGGAGGAGGAACCTTGCTTGGAACCTTCATGGCCGCACCTTCAGCTCGTCTACGAGCTTCTCCTTCGATATATTGTTTCCTCTGACACCGACACGAAAATCGCGAAACGGTACATTGATCACTCTTTCGTTTTGAAGCTTCTTGATTTGTTTGATTCTGAGGACCCTAGGGAGCGTGAGTATTTGAAAACTATACTGCATCGTATATATGGGAAATTCATGGTTCATAGACCGTTTATTAGGAAAGCGATTAATAATATATTTTATCGGTTTATTTATGAGACTGAGAAGCATAGTGGTATTGGGGAGCTTTTGGAGATTCTGGGTAGTATCATAAATGGGTTTGCTTTGCCCATGAAGGAGGAGCATAAGCTGTTCCTTGTGAGGGCGCTTTTGCCTCTGCATAAGCCTAAGACGGTTGGATTGTACCACCAGCAGTTGTCTTATTGTGTGACTCAGTTTGTTGAGAAGGATTTCAAGCTCGCCGATACGGTGATTAGGGGTTTGTTGAAGTACTGGCCTGTTACCAATTGCCAGAAGGAGGTTCTCTTCCTTGGAGAACTTGAGGAAGTGCTTGAGGCCTCTCAACCAGCAGAGTTTCAGCGGTGCATGGTTCCCCTTTTTCGACAGATTTCACGCTGCCTCAATAGCTCTCATTTTCAGGTTGCAGAGCGGGCCCTCTTTTTGTGGAATAATGAGCACATCGTGAGCTTAATTGCCCAAAACAGGACAGTGATACTACCAATAATATTTGAAGCATTTGAGAAAAACATCCAGTCTCATTGGAACCAGGCAGTTCACGGGCTCACCGTGAACGTTCGAAAAATGTTCTTGGAAATGGATGCAGAATTATTCGAAGAGTGCCAGAGGCAGTATGCAGAGAGAGAAGCTAAAGCAAAAGAAGTGGAAGAGCAGAGGGAACTAAATTGGAAGAGGCTAGCAGACGCTGCTACACAGAACGGGGTGGAGGATATGGTCACAGTTTAG 1482 0.5007 MLKKIMKGGHKKPSKSSDSADPMTAVAAAVNNVVVNHASRGGGGTAALPAPPSSNSAGAPIQPPSGAMEILPPFREVAASDRQSLFLRKLKICCYVLDFSDTLKSVREKEIKRQTLMELVEFIQSGSGKLSENCQEEMIRMISANIFRCLPPASHENTGQETTDPEEEEPCLEPSWPHLQLVYELLLRYIVSSDTDTKIAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETEKHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKTVGLYHQQLSYCVTQFVEKDFKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEASQPAEFQRCMVPLFRQISRCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVILPIIFEAFEKNIQSHWNQAVHGLTVNVRKMFLEMDAELFEECQRQYAEREAKAKEVEEQRELNWKRLADAATQNGVEDMVTV* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0122 493 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 486 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dod07g0122 493 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 486 - -
Dod07g0122 493 Gene3D - 79 481 IPR011989 -
Dod07g0122 493 SUPERFAMILY ARM repeat 83 464 IPR016024 -
Dod07g0122 493 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 71 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dod07g0122 493 PIRSF PP2A_B56 3 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dod07g0122 493 Coils Coil 450 470 - -
Dod07g0122 493 MobiDBLite consensus disorder prediction 1 22 - -
Dod07g0122 493 MobiDBLite consensus disorder prediction 41 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0122 Dod-Chr7 1472558 1477306 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0122 K11584 - gmx:100814538 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0122 07 1472558 1477306 Dod07g0122 07 1472558 1477306 ECH
Dod01g2770 01 67552911 67559145 Dod07g0122 07 1472558 1477306 PCT