Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2770 ATGTTCAAGAGAATCATGAAGGGAGGGCCGAAGAAGCCCTCCAAATCCGACGACTACGGTGCTCCCGCTGGCAACAACAACAACGGCCTCATTCCATCGTCTCAGGCCAACAACGTGGTCGTCAACCATGCCTCGCGCGGCGGAGCCGCCACCGCCACAGCGGCGGCCGCGAATTCGGGGGCGGCGCCGATGATCCCTCCTCCGTCCGGCGCGATGGAACCGCTTCCTCCGTTCCGCGACGTGCCAGTTTCCGAGCGACAGAGCCTCTTCCTCCGGAAGCTCCAGATTTGCTGCTACCTATTGGACTTCTCCGACACGTTGAAGAGCGTTCGGGAGAAGGAGATCAAGCGGCAAACGCTGATGGAGCTCGTGGATTTCATCCAGTCTGGTTCCGGGAAGATCACGGAGAATTGCCAGGAAGAGATGATACGAATGATATCGGTGAACATTTTCCGGTGCCTCCCGCCGGCGTCGCACGAGAACACCGGCCAGGAAACCACCGATCCGGAGGAGGACGAGCCGTGTTTGGAGCCAGCCTGGCCGCACTTGCAGCTCGTCTACGAGCTCCTCCTTCGGTACGTTGTTTCTTCTGATACCGATACAAAAGTTGCGAAACGTTATATTGATCATTCTTTCGTGCTCAAGTTGCTTGATTTGTTTGATTCCGAGGATCCTAGAGAGCGTGAGTATTTGAAAACGATATTGCACCGTATATATGGGAAATTCATGGTTCATAGGCCGTTTATTAGGAAGGCTATTAACAATATTTTTTATCGGTTTATATATGAGACGGAGAGGCACTGTGGTATTGGGGAGCTTCTTGAGATTCTTGGCAGCATCATTAATGGGTTTGCCTTGCCCATGAAGGAGGAGCATAAGTTGTTCCTCGTGAGGGCGCTTCTTCCATTGCATAAGCCTAAGCCTTTGGCCATGTACCATCAGCAGTTGTCTTATTGCGTTTCGCAGTTTGTTGAGAAGGATTACAAGCTTGCCGATACGGTTATTAGGGTGTTGTTGAAGTACTGGCCCGTCACGAATTGCCAGAAGGAGGTTCTCTTCCTTGGGGAACTGGAGGAGGTGCTGGAGGCCACGCAGGTGGCAGAGTTTCAACGCTGCATGGTTCCTCTTTTTAGACAGATTGCACGCTGCCTTAACAGTCCTCACTTTCAGGTTGCAGAACGGGCTCTCTTTCTGTGGAATAATGAGCACATTGTCAGCTTAATTGCCCAAAACAGGACCGTAGTATTGCCCATAATATTTGAAGCATTGGAGAGAAACATCCAGAGTCACTGGAACCAGGCAGTTCACGGGCTGACTGTGAATGTTCGGAAAATGTTCCTGGAAATGGATCCTGAATTGTTTGAAGAGTGCCAGAGGCAGTATGCAGAGAGAGAGGCTAAAGCCAAAGAGGTGGAACAGCAGCGGGAATTGAATTGGAAGAGACTGACAGAGGCAGCAGCTGCACAAAATGGCCCGGATATGATCACAGTTTAG 1494 0.5134 MFKRIMKGGPKKPSKSDDYGAPAGNNNNGLIPSSQANNVVVNHASRGGAATATAAAANSGAAPMIPPPSGAMEPLPPFRDVPVSERQSLFLRKLQICCYLLDFSDTLKSVREKEIKRQTLMELVDFIQSGSGKITENCQEEMIRMISVNIFRCLPPASHENTGQETTDPEEDEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHCGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKPLAMYHQQLSYCVSQFVEKDYKLADTVIRVLLKYWPVTNCQKEVLFLGELEEVLEATQVAEFQRCMVPLFRQIARCLNSPHFQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEALERNIQSHWNQAVHGLTVNVRKMFLEMDPELFEECQRQYAEREAKAKEVEQQRELNWKRLTEAAAAQNGPDMITV* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2770 497 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 491 - -
Dod01g2770 497 SUPERFAMILY ARM repeat 87 468 IPR016024 -
Dod01g2770 497 Coils Coil 454 474 - -
Dod01g2770 497 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dod01g2770 497 Gene3D - 82 485 IPR011989 -
Dod01g2770 497 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 75 486 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dod01g2770 497 MobiDBLite consensus disorder prediction 20 34 - -
Dod01g2770 497 PIRSF PP2A_B56 12 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dod01g2770 497 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2770 Dod-Chr1 67552911 67559145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2770 K11584 - rcu:8283979 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2770 01 67552911 67559145 Dod07g0122 07 1472558 1477306 PCT