Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2538 ATGAGCTCAGAAACCACCCTAAAGCTTCCAGTCATTGACTTCAACGACCTCAATTTGGATGAGAACAATCTTAATAAGTGGGAGGCAGTGAAATCACAAGTCCATGATGCACTAGTAGAGTATGGTTGCTTTGAAGCAATTTTTGATAAGGTTCGTTTAGACCTTCGCAAGGCCTTATTTCCTGCACTTGAAGAGCTCTTCGATCTCCCTCTACAAACCAAGCTACTCAATGTGTCTAAGAAGCCCTATCATGGATATGTTGGCCAATATCCTATGGTCCCACTTTATGAAAGCGTGGGCATTGACGATGCAGATGTCCTTGAGAAAGTAGAAACCACCACCAACATCTTTTGGCCTAATGGAAACCCAAGATTTAGCAAAAATATACAGTCCTTCTCTGAGCAGCTATCAGAATTGGATCAGATTATTAGGAAGATGGTTTTGGAAAGCTTGGGGGTTGAAAAGTACTTTGAGGAGCACATCAACTCAAGCAATTACCTTCTCCGGGTTATGAAATACAAAGGCCCTCAAACTAGTGAGGCAAAGATAGGCCTCAGCTCACACACAGATAAGAACATAGTGACCATATTGTACCAAAATCAAGTGGAGGGTCTGGAGGTGCTGACCAAAGATGGAGAATGGATAACCTACAAGCCCTCCCAAGACAGTTTCATTGCTATGATTGGTGACTCTCTCCATGCATGGTCAAATGGAAGGCTTCATTCACCATTTCACCGAGTGATGATGACTGGGAATGAAGCTAGATACTCTACGGGGCTGTTCTCAGTCCCCAAAGCTGGGTACACCATAAAAGCCCCGGAGGAGCTTGTGGATGAGGAGCACCCTCTGCTCTATAAGCCTTATGATCATGTTGAGTTCCTCAATTATTATTACACTCCAGCAGGCCAGCAAGATCAGTTTCCTATGCGCACTTACTGTGGCGTTTGA 948 0.442 MSSETTLKLPVIDFNDLNLDENNLNKWEAVKSQVHDALVEYGCFEAIFDKVRLDLRKALFPALEELFDLPLQTKLLNVSKKPYHGYVGQYPMVPLYESVGIDDADVLEKVETTTNIFWPNGNPRFSKNIQSFSEQLSELDQIIRKMVLESLGVEKYFEEHINSSNYLLRVMKYKGPQTSEAKIGLSSHTDKNIVTILYQNQVEGLEVLTKDGEWITYKPSQDSFIAMIGDSLHAWSNGRLHSPFHRVMMTGNEARYSTGLFSVPKAGYTIKAPEELVDEEHPLLYKPYDHVEFLNYYYTPAGQQDQFPMRTYCGV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2538 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
Dod06g2538 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 264 IPR005123 -
Dod06g2538 315 Gene3D - 7 311 IPR027443 -
Dod06g2538 315 SUPERFAMILY Clavaminate synthase-like 5 300 - -
Dod06g2538 315 Pfam 2OG-Fe(II) oxygenase superfamily 170 261 IPR044861 -
Dod06g2538 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 4 314 - -
Dod06g2538 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2538 Dod-Chr6 54441726 54443845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2538 3 298 Glycosyltransferase AT5G59530 23.203 1.21e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2538 - - gmx:100784444 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2538 06 54441726 54443845 Dod06g2538 06 54441726 54443845 ECH
Dod06g2538 06 54441726 54443845 Dod01g0758 01 13600762 13602209 ECH
Dod04g2751 04 51427103 51430141 Dod06g2538 06 54441726 54443845 ECH