Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2751 ATGTCTTCCCCAAGCAAACGCCGAGACATGGACTTGATGAAACTGATGATGGGTGATTACAAGGTGGAAATGATCAACGATGGCATGCAAGAGTTCTTTGTAGAGTTTCACGGACCAAAAGACAGTCCCTATCAAGATGGTGTATGGAAGGTAAGGGTGGAGCTACCTGATGCTTACCCTTATAAGTCCCCTTCCATTGGTTTTGTCAACAAAATTTACCACCCTAATGTTGATGAAATGTCTGGGTCAGTATGCTTAGATGTTATTAACCAGACCTGGAGTCCCATGTTTGACCTTGTTAATGTGTTTGAAGTATTTCTTCCTCAACTTCTTCTTTACCCCAACGCATCAGATCCATTGAATGGCGATGCTGCTGCCTTGATGATGCGAGATCATGCCGCATATGAACAAAAAGTCAAAGAATATTGTGAAAAATATGCCAAGCCAGAAGATGCTGGAGCTTCTCCGGAGGAAAATTCTAGTGACGATGAGCTAAGTGAAGAAGATTATGCCTCTAGTGATGATGCCATTGCAGGCCAACCTGATCCTTAG 552 0.4312 MSSPSKRRDMDLMKLMMGDYKVEMINDGMQEFFVEFHGPKDSPYQDGVWKVRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNASDPLNGDAAALMMRDHAAYEQKVKEYCEKYAKPEDAGASPEENSSDDELSEEDYASSDDAIAGQPDP* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2751 183 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 183 - -
Dod04g2751 183 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 73 89 IPR023313 -
Dod04g2751 183 MobiDBLite consensus disorder prediction 146 183 - -
Dod04g2751 183 CDD UBCc 10 143 IPR000608 -
Dod04g2751 183 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 148 IPR000608 -
Dod04g2751 183 MobiDBLite consensus disorder prediction 156 171 - -
Dod04g2751 183 Pfam Ubiquitin-conjugating enzyme 12 142 IPR000608 -
Dod04g2751 183 Gene3D Ubiquitin Conjugating Enzyme 1 160 IPR016135 -
Dod04g2751 183 PANTHER UBIQUITIN-CONJUGATING ENZYME E2-21 KDA 1 3 183 - -
Dod04g2751 183 SUPERFAMILY UBC-like 5 148 IPR016135 -
Dod04g2751 183 SMART ubc_7 4 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2751 Dod-Chr4 51427103 51430141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2751 3 183 Miscellaneous Gene Families AT3G17000 22.222 6.52e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2751 K10576 - gmx:100791133 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2751 04 51427103 51430141 Dod04g2751 04 51427103 51430141 ECH
Dod04g2751 04 51427103 51430141 Dod06g2538 06 54441726 54443845 ECH
Dod04g2751 04 51427103 51430141 Dod01g0758 01 13600762 13602209 ECH