Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2500 ATGGTAGATGTGCCATCAAATGGATTGAAAAATCAAGGTAACGCAACAAGTAAACCTAGCACATCAGAGGATTTCTGGACCACCAGCACGCATGGTAATATGGACAACAGTGCTGGTCAGTCACAGGGAAGCATGTCCTCAACCAGCGCAACAAACCAAGCCTTGGTTCCTCATGGTGGTTCTTGCAAAACCAGCAACCCCAGTGAGTTTGTAAACCACGGTTTTATTCTCTGGAATCAGACTCGGCAACATTGGGTAAGAAATAAGAGGTACGAGAACCAATCACAACAATTGCGAGAACCTAAATTGAGTTGGAATGCTACATATGAAAGTTTATTGGGGAGCAACAAGCCATTTCGGCAGCCTGTCCCTCTAGCTGAAATGGTAGATTTTCTTGTGGATATCTGGGAACAGGAGGGCCTATATGACTGA 432 0.4491 MVDVPSNGLKNQGNATSKPSTSEDFWTTSTHGNMDNSAGQSQGSMSSTSATNQALVPHGGSCKTSNPSEFVNHGFILWNQTRQHWVRNKRYENQSQQLREPKLSWNATYESLLGSNKPFRQPVPLAEMVDFLVDIWEQEGLYD* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2500 143 PANTHER OS07G0479600 PROTEIN 2 143 - -
Dod06g2500 143 MobiDBLite consensus disorder prediction 7 63 - -
Dod06g2500 143 PANTHER DUF4050 FAMILY PROTEIN 2 143 - -
Dod06g2500 143 MobiDBLite consensus disorder prediction 1 63 - -
Dod06g2500 143 Pfam Protein of unknown function (DUF4050) 102 143 IPR025124 -
Dod06g2500 143 Pfam Protein of unknown function (DUF4050) 34 101 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2500 Dod-Chr6 54043861 54047223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2500 - - gmx:547651 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2500 06 54043861 54047223 Dod10g2099 10 42862123 42865415 ECH
Dod05g1976 05 45498906 45505984 Dod06g2500 06 54043861 54047223 ECH
Dod08g1684 08 39860195 39863864 Dod06g2500 06 54043861 54047223 ECH
Dod06g2500 06 54043861 54047223 Dod06g2500 06 54043861 54047223 ECH
Dod10g2099 10 42862123 42865415 Dod06g2500 06 54043861 54047223 PCT